RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 RRAGCQ9HB90 399 aa20.32■□□□□ 0.84
TRIM39-211ENST00000458516 A0A0D9SFI3 127 aa20.31■□□□□ 0.84
TRIM39-211ENST00000458516 CHMLP26374 656 aa20.31■□□□□ 0.84
TRIM39-211ENST00000458516 NMIQ13287 307 aaPredicted RBP20.31■□□□□ 0.84
TRIM39-211ENST00000458516 NBPF9Q3BBW0 867 aa20.31■□□□□ 0.84
TRIM39-211ENST00000458516 FAM227BQ96M60 508 aa20.31■□□□□ 0.84
TRIM39-211ENST00000458516 PUS7LQ9H0K6 701 aaKnown RBP20.31■□□□□ 0.84
TRIM39-211ENST00000458516 AATFQ9NY61 560 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRIM39-211ENST00000458516 NAV1Q8NEY1 1877 aa20.3■□□□□ 0.84
TRIM39-211ENST00000458516 HIP1O00291 1037 aa20.3■□□□□ 0.84
TRIM39-211ENST00000458516 VEGFAP15692 232 aaPredicted RBP20.3■□□□□ 0.84
TRIM39-211ENST00000458516 PPP4CP60510 307 aa20.3■□□□□ 0.84
TRIM39-211ENST00000458516 DYNLL1P63167 89 aaKnown RBP20.3■□□□□ 0.84
TRIM39-211ENST00000458516 USP50Q70EL3 339 aaPredicted RBP20.3■□□□□ 0.84
TRIM39-211ENST00000458516 SEC62Q99442 399 aaKnown RBP20.3■□□□□ 0.84
TRIM39-211ENST00000458516 RIOK1Q9BRS2 568 aaKnown RBP20.3■□□□□ 0.84
TRIM39-211ENST00000458516 DIAPH3Q9NSV4 1193 aa20.3■□□□□ 0.84
TRIM39-211ENST00000458516 ASTN2O75129 1339 aaPredicted RBP20.29■□□□□ 0.84
TRIM39-211ENST00000458516 MAGEB6P1A0A0J9YX57 407 aa20.29■□□□□ 0.84
TRIM39-211ENST00000458516 M0R2C6 588 aa20.29■□□□□ 0.84
TRIM39-211ENST00000458516 YY1P25490 414 aa20.29■□□□□ 0.84
TRIM39-211ENST00000458516 RHBDL3P58872 404 aa20.29■□□□□ 0.84
TRIM39-211ENST00000458516 CDC42EP5Q6NZY7 148 aa20.29■□□□□ 0.84
TRIM39-211ENST00000458516 NOL10Q9BSC4 688 aaKnown RBP20.29■□□□□ 0.84
TRIM39-211ENST00000458516 TDRD3Q9H7E2 651 aaKnown RBP20.29■□□□□ 0.84
TRIM39-211ENST00000458516 HELLSQ9NRZ9 838 aa20.29■□□□□ 0.84
TRIM39-211ENST00000458516 DDX60LQ5H9U9 1706 aaKnown RBP20.29■□□□□ 0.84
TRIM39-211ENST00000458516 MYH1P12882 1939 aa20.29■□□□□ 0.84
TRIM39-211ENST00000458516 BAZ2AQ9UIF9 1905 aaKnown RBP20.29■□□□□ 0.84
TRIM39-211ENST00000458516 CDC45O75419 566 aa20.28■□□□□ 0.84
TRIM39-211ENST00000458516 MBD4O95243 580 aa20.28■□□□□ 0.84
TRIM39-211ENST00000458516 BAG3O95817 575 aa20.28■□□□□ 0.84
TRIM39-211ENST00000458516 SPDYE2Q495Y8 402 aa20.28■□□□□ 0.84
TRIM39-211ENST00000458516 CWC27Q6UX04 472 aaKnown RBP20.28■□□□□ 0.84
TRIM39-211ENST00000458516 LCORLQ8N3X6 602 aa20.28■□□□□ 0.84
TRIM39-211ENST00000458516 SH3RF3Q8TEJ3 882 aaPredicted RBP20.28■□□□□ 0.84
TRIM39-211ENST00000458516 PNMA8AQ86V59 439 aaPredicted RBP20.27■□□□□ 0.84
TRIM39-211ENST00000458516 AIDAQ96BJ3 306 aa20.27■□□□□ 0.84
TRIM39-211ENST00000458516 IL25Q9H293 177 aa20.27■□□□□ 0.84
TRIM39-211ENST00000458516 ARMT1Q9H993 441 aa20.27■□□□□ 0.84
TRIM39-211ENST00000458516 USP40Q9NVE5 1235 aa20.27■□□□□ 0.84
TRIM39-211ENST00000458516 ZNF70Q9UC06 446 aaPredicted RBP20.27■□□□□ 0.84
TRIM39-211ENST00000458516 CLRN2A0PK11 232 aa20.26■□□□□ 0.83
TRIM39-211ENST00000458516 GPAA1O43292 621 aa20.26■□□□□ 0.83
TRIM39-211ENST00000458516 PLCG2P16885 1265 aa20.26■□□□□ 0.83
TRIM39-211ENST00000458516 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
TRIM39-211ENST00000458516 CCDC129Q6ZRS4 1044 aa20.26■□□□□ 0.83
TRIM39-211ENST00000458516 CERS3Q8IU89 383 aa20.26■□□□□ 0.83
TRIM39-211ENST00000458516 GPBP1L1Q9HC44 474 aaPredicted RBP20.26■□□□□ 0.83
TRIM39-211ENST00000458516 RAD50Q92878 1312 aa20.26■□□□□ 0.83
TRIM39-211ENST00000458516 MYO1BO43795 1136 aa20.25■□□□□ 0.83
TRIM39-211ENST00000458516 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
TRIM39-211ENST00000458516 POTEJP0CG39 1038 aa20.25■□□□□ 0.83
TRIM39-211ENST00000458516 CACNB3P54284 484 aa20.25■□□□□ 0.83
TRIM39-211ENST00000458516 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
TRIM39-211ENST00000458516 ZNF589Q86UQ0 364 aaPredicted RBP20.25■□□□□ 0.83
TRIM39-211ENST00000458516 TEX11Q8IYF3 940 aa20.25■□□□□ 0.83
TRIM39-211ENST00000458516 STRBPQ96SI9 672 aaKnown RBP20.25■□□□□ 0.83
TRIM39-211ENST00000458516 GGA3Q9NZ52 723 aa20.25■□□□□ 0.83
TRIM39-211ENST00000458516 LAMB1P07942 1786 aa20.24■□□□□ 0.83
TRIM39-211ENST00000458516 WDHD1O75717 1129 aaPredicted RBP20.24■□□□□ 0.83
TRIM39-211ENST00000458516 ANGEL2Q5VTE6 544 aaKnown RBP20.24■□□□□ 0.83
TRIM39-211ENST00000458516 PGAP2Q9UHJ9 254 aa20.24■□□□□ 0.83
TRIM39-211ENST00000458516 CCDC171Q6TFL3 1326 aa20.24■□□□□ 0.83
TRIM39-211ENST00000458516 NFIAQ12857 509 aa20.23■□□□□ 0.83
TRIM39-211ENST00000458516 ZC3H15Q8WU90 426 aaKnown RBP20.23■□□□□ 0.83
TRIM39-211ENST00000458516 RUFY2Q8WXA3 655 aa20.23■□□□□ 0.83
TRIM39-211ENST00000458516 IDI2Q9BXS1 227 aa20.23■□□□□ 0.83
TRIM39-211ENST00000458516 VEZTQ9HBM0 779 aa20.23■□□□□ 0.83
TRIM39-211ENST00000458516 DDX4Q9NQI0 724 aaKnown RBP20.23■□□□□ 0.83
TRIM39-211ENST00000458516 TMOD2Q9NZR1 351 aa20.23■□□□□ 0.83
TRIM39-211ENST00000458516 PITPNM2Q9BZ72 1349 aa20.23■□□□□ 0.83
TRIM39-211ENST00000458516 KIF3CO14782 793 aa20.22■□□□□ 0.83
TRIM39-211ENST00000458516 SGSM2O43147 1006 aa20.22■□□□□ 0.83
TRIM39-211ENST00000458516 PRKAB2O43741 272 aa20.22■□□□□ 0.83
TRIM39-211ENST00000458516 FKBP1CQ5VVH2 108 aa20.22■□□□□ 0.83
TRIM39-211ENST00000458516 ZNF784Q8NCA9 323 aaPredicted RBP20.22■□□□□ 0.83
TRIM39-211ENST00000458516 ESYT1Q9BSJ8 1104 aa20.22■□□□□ 0.83
TRIM39-211ENST00000458516 CRNKL1Q9BZJ0 848 aaKnown RBP20.22■□□□□ 0.83
TRIM39-211ENST00000458516 FAM198AQ9UFP1 575 aa20.22■□□□□ 0.83
TRIM39-211ENST00000458516 SIPA1L1O43166 1804 aa20.22■□□□□ 0.83
TRIM39-211ENST00000458516 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
TRIM39-211ENST00000458516 TCP10L2B9ZVM9 353 aa20.21■□□□□ 0.83
TRIM39-211ENST00000458516 CASC1Q6TDU7 716 aa20.21■□□□□ 0.83
TRIM39-211ENST00000458516 APOBEC3FQ8IUX4 373 aaKnown RBP20.21■□□□□ 0.83
TRIM39-211ENST00000458516 TGFBRAP1Q8WUH2 860 aa20.21■□□□□ 0.83
TRIM39-211ENST00000458516 SDR42E1Q8WUS8 393 aa20.21■□□□□ 0.83
TRIM39-211ENST00000458516 SCAF8Q9UPN6 1271 aaKnown RBP20.21■□□□□ 0.83
TRIM39-211ENST00000458516 SLC4A4Q9Y6R1 1079 aa20.21■□□□□ 0.83
TRIM39-211ENST00000458516 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 FOXP2O15409 715 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 NPM3O75607 178 aaKnown RBP20.2■□□□□ 0.82
TRIM39-211ENST00000458516 GNAT2P19087 354 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 PICALMQ13492 652 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 VPS53Q5VIR6 699 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 LDHDQ86WU2 507 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 MAPKAPK5Q8IW41 473 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 FLT1P17948 1338 aa20.2■□□□□ 0.82
TRIM39-211ENST00000458516 COL2A1P02458 1487 aaPredicted RBP20.19■□□□□ 0.82
TRIM39-211ENST00000458516 GSG1L2A8MUP6 293 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms