RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 FAM160A1Q05DH4 1040 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 ZNF215Q9UL58 517 aaPredicted RBP18.74■□□□□ 0.59
LSS-205ENST00000457828 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 CDKL5O76039 1030 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 CACTINQ8WUQ7 758 aaKnown RBP18.74■□□□□ 0.59
LSS-205ENST00000457828 DENND2AQ9ULE3 1009 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 FILIP1LQ4L180 1135 aa18.73■□□□□ 0.59
LSS-205ENST00000457828 WDR78Q5VTH9 848 aa18.73■□□□□ 0.59
LSS-205ENST00000457828 TMEM87AQ8NBN3 555 aa18.73■□□□□ 0.59
LSS-205ENST00000457828 SPTLC2O15270 562 aa18.73■□□□□ 0.59
LSS-205ENST00000457828 SYKP43405 635 aa18.73■□□□□ 0.59
LSS-205ENST00000457828 KIF20AO95235 890 aa18.73■□□□□ 0.59
LSS-205ENST00000457828 NLRP10Q86W26 655 aa18.73■□□□□ 0.59
LSS-205ENST00000457828 MAGEB6P1A0A0J9YX57 407 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 PPIP5K2O43314 1243 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 KIAA1210Q9ULL0 1709 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 CASQ1P31415 396 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 GRM1Q13255 1194 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 HLFQ16534 295 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 SMIM5Q71RC9 77 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 KCNG4Q8TDN1 519 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 MAP4K1Q92918 833 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 FTOQ9C0B1 505 aaKnown RBP eCLIP18.72■□□□□ 0.596e-10■□□□□ 9.5
LSS-205ENST00000457828 MCM9Q9NXL9 1143 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 SLC12A7Q9Y666 1083 aa18.72■□□□□ 0.59
LSS-205ENST00000457828 ERFEQ4G0M1 354 aa18.71■□□□□ 0.59
LSS-205ENST00000457828 TTC14Q96N46 770 aa18.71■□□□□ 0.59
LSS-205ENST00000457828 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
LSS-205ENST00000457828 CNKSR1Q969H4 720 aa18.71■□□□□ 0.59
LSS-205ENST00000457828 CWC15Q9P013 229 aaKnown RBP18.71■□□□□ 0.59
LSS-205ENST00000457828 DMTNQ08495 405 aa18.71■□□□□ 0.59
LSS-205ENST00000457828 LRRC24Q50LG9 513 aa18.71■□□□□ 0.59
LSS-205ENST00000457828 USP28Q96RU2 1077 aa18.71■□□□□ 0.59
LSS-205ENST00000457828 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
LSS-205ENST00000457828 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 ZBTB7AO95365 584 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 LEKR1Q6ZMV7 388 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 ZNF589Q86UQ0 364 aaPredicted RBP18.7■□□□□ 0.58
LSS-205ENST00000457828 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 CALCOCO1Q9P1Z2 691 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 MROH5Q6ZUA9 1318 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 NAA30Q147X3 362 aaPredicted RBP18.7■□□□□ 0.58
LSS-205ENST00000457828 RXRAP19793 462 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 TMEM67Q5HYA8 995 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 DACH1Q9UI36 760 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 SEC31BQ9NQW1 1179 aa18.7■□□□□ 0.58
LSS-205ENST00000457828 NCAPD2Q15021 1401 aa18.69■□□□□ 0.58
LSS-205ENST00000457828 CYP19A1P11511 503 aaPredicted RBP18.69■□□□□ 0.58
LSS-205ENST00000457828 EIF6P56537 245 aaKnown RBP18.69■□□□□ 0.58
LSS-205ENST00000457828 BARGINQ6ZT62 677 aa18.69■□□□□ 0.58
LSS-205ENST00000457828 WDHD1O75717 1129 aaPredicted RBP18.69■□□□□ 0.58
LSS-205ENST00000457828 ARHGAP27Q6ZUM4 889 aa18.69■□□□□ 0.58
LSS-205ENST00000457828 LRRC8AQ8IWT6 810 aa18.69■□□□□ 0.58
LSS-205ENST00000457828 NCOA7Q8NI08 942 aa18.69■□□□□ 0.58
LSS-205ENST00000457828 SMARCE1Q969G3 411 aa18.69■□□□□ 0.58
LSS-205ENST00000457828 CCDC102AQ96A19 550 aa18.69■□□□□ 0.58
LSS-205ENST00000457828 CCDC47Q96A33 483 aaKnown RBP18.69■□□□□ 0.58
LSS-205ENST00000457828 ZFP91Q96JP5 570 aaPredicted RBP18.69■□□□□ 0.58
LSS-205ENST00000457828 CCDC196A0A1B0GTZ2 297 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 PRC1O43663 620 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 GYG1P46976 350 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 ARID5BQ14865 1188 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 NIM1KQ8IY84 436 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 ARHGEF1Q92888 912 aaKnown RBP18.68■□□□□ 0.58
LSS-205ENST00000457828 PUS3Q9BZE2 481 aaKnown RBP18.68■□□□□ 0.58
LSS-205ENST00000457828 ACBD3Q9H3P7 528 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 VAT1LQ9HCJ6 419 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 PLCG2P16885 1265 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 POLA2Q14181 598 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 NECTIN1Q15223 517 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 KIF4BQ2VIQ3 1234 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 CCDC102BQ68D86 513 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 CAGE1Q8TC20 777 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 ALG1Q9BT22 464 aa18.68■□□□□ 0.58
LSS-205ENST00000457828 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
LSS-205ENST00000457828 GTF2IP78347 998 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 C11orf57Q6ZUT1 292 aaPredicted RBP18.67■□□□□ 0.58
LSS-205ENST00000457828 CATIPQ7Z7H3 387 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 SUPT20HQ8NEM7 779 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 SEC63Q9UGP8 760 aaKnown RBP18.67■□□□□ 0.58
LSS-205ENST00000457828 PPLO60437 1756 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 MBD4O95243 580 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 METAP2P50579 478 aaKnown RBP eCLIP18.67■□□□□ 0.58
LSS-205ENST00000457828 TIGD1Q96MW7 591 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 CCDC12Q8WUD4 166 aaPredicted RBP18.67■□□□□ 0.58
LSS-205ENST00000457828 IARSP41252 1262 aaKnown RBP18.67■□□□□ 0.58
LSS-205ENST00000457828 WDR66Q8TBY9 1149 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
LSS-205ENST00000457828 GOLGA8AA7E2F4 631 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 DOK7Q18PE1 504 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 CCDC70Q6NSX1 233 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 TDRD7Q8NHU6 1098 aaKnown RBP18.66■□□□□ 0.58
LSS-205ENST00000457828 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 TEX11Q8IYF3 940 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 XPO4Q9C0E2 1151 aaKnown RBP18.66■□□□□ 0.58
LSS-205ENST00000457828 TSPY3P0CV98 308 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 TSPY8P0CW00 308 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms