RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 MYCBPQ99417 103 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 HPS5Q9UPZ3 1129 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 FAM169AQ9Y6X4 670 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 XRN1Q8IZH2 1706 aaKnown RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 NSD2O96028 1365 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 CEP170BQ9Y4F5 1589 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 RELNP78509 3460 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 GIGYF1O75420 1035 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 IGKV5-2P06315 115 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 FAM160A1Q05DH4 1040 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 SF3A3Q12874 501 aaKnown RBP eCLIP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 PNOCQ13519 176 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 MAEAQ7L5Y9 396 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 MSANTD4Q8NCY6 345 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 RABGGTAQ92696 567 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 RRP36Q96EU6 259 aaKnown RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 SH3GL2Q99962 352 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 AGXT2Q9BYV1 514 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 DDX20Q9UHI6 824 aaKnown RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 SALL4Q9UJQ4 1053 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 TET3O43151 1660 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 CCNHP51946 323 aaPredicted RBP5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 PPP2R5AQ15172 486 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 PTPAQ15257 358 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 ACCSLQ4AC99 568 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 MMS19Q96T76 1030 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 HPSEQ9Y251 543 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 SETBP1Q9Y6X0 1596 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 NEXMIFQ5QGS0 1516 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 ZNF263O14978 683 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 NBPF9Q3BBW0 867 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 NUTM2GQ5VZR2 741 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 MMS22LQ6ZRQ5 1243 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 IRF2BP1Q8IU81 584 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 PUS7Q96PZ0 661 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 TUBE1Q9UJT0 475 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 MYO1BO43795 1136 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 SMC2O95347 1197 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 RXRAP19793 462 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 KCNJ6P48051 423 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 ME1P48163 572 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 SLC35F6Q8N357 371 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 USHBP1Q8N6Y0 703 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 STAMQ92783 540 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 SPATA31D1Q6ZQQ2 1576 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 PTPDC1A2A3K4 754 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 FAM205CA6NFA0 338 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 BECN2A8MW95 431 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 GPTP24298 496 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 EXOSC10Q01780 885 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 EARS2Q5JPH6 523 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 BLOC1S2Q6QNY1 142 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 VSTM4Q8IW00 320 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 GPR161Q8N6U8 529 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 ZKSCAN4Q969J2 545 aaPredicted RBP5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 SDF4Q9BRK5 362 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 MYO5AQ9Y4I1 1855 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 PEAK1Q9H792 1746 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 PHLPP2Q6ZVD8 1323 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 CDHR2Q9BYE9 1310 aa5.23□□□□□ -1.57
DEPDC1-202ENST00000456315 GOLGA6L6A8MZA4 724 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 RNF40O75150 1001 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 GYPCP04921 128 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 FAM163BP0C2L3 166 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 PFKFB1P16118 471 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 UBAP2Q5T6F2 1119 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 PI16Q6UXB8 463 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 HNRNPLLQ8WVV9 542 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 MIEF2Q96C03 454 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 ECHDC1Q9NTX5 307 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 FAM217BQ9NTX9 383 aaPredicted RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 TSPYL4Q9UJ04 414 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 KIDINS220Q9ULH0 1771 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 ARAP3Q8WWN8 1544 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 FRMD3A2A2Y4 597 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 MDM2Q00987 491 aaPredicted RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 BYSLQ13895 437 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 DDX46Q7L014 1031 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 RAI14Q9P0K7 980 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 CHPF2Q9P2E5 772 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 KAT6BQ8WYB5 2073 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 MYH1P12882 1939 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 METP08581 1390 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 JCADQ9P266 1359 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 A0A1B0GVG6 124 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 RASSF10A6NK89 507 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 EIF4E1BA6NMX2 242 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 DCDC2CA8MYV0 355 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 SHOX2O60902 331 aaPredicted RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 PPFIA4O75335 1185 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 PDCLQ13371 301 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 MAP9Q49MG5 647 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 ZC3H12AQ5D1E8 599 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 CREBRFQ8IUR6 639 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 MICALL1Q8N3F8 863 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 CPLX3Q8WVH0 158 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 CCDC9Q9Y3X0 531 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 USP42Q9H9J4 1324 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 KIF1BO60333 1816 aa5.22□□□□□ -1.57
DEPDC1-202ENST00000456315 GOLGA6L19H0YKK7 550 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms