RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 MCM4P33991 863 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 MCM5P33992 734 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 LIFRP42702 1097 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 TGFB2P61812 414 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 HDLBPQ00341 1268 aaKnown RBP8.87□□□□□ -0.99
ERCC3-204ENST00000456257 AKNAD1Q5T1N1 836 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 MSL1Q68DK7 614 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 Q6ZUG5 572 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 SGMS1Q86VZ5 419 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 NCOA7Q8NI08 942 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 TNPO1Q92973 898 aaKnown RBP8.87□□□□□ -0.99
ERCC3-204ENST00000456257 TMEM87BQ96K49 555 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 SGIP1Q9BQI5 828 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 CNNM2Q9H8M5 875 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 SLC4A4Q9Y6R1 1079 aa8.87□□□□□ -0.99
ERCC3-204ENST00000456257 MYO5AQ9Y4I1 1855 aaKnown RBP8.87□□□□□ -0.99
ERCC3-204ENST00000456257 DUOX1Q9NRD9 1551 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 C6orf229H3BNL8 230 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 ORC4O43929 436 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 FRAT2O75474 233 aaPredicted RBP8.86□□□□□ -0.99
ERCC3-204ENST00000456257 PDIA3P30101 505 aaKnown RBP8.86□□□□□ -0.99
ERCC3-204ENST00000456257 RCAN1P53805 252 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 GRIK5Q16478 980 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 CTR9Q6PD62 1173 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 DPP8Q6V1X1 898 aaPredicted RBP8.86□□□□□ -0.99
ERCC3-204ENST00000456257 TBC1D10CQ8IV04 446 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 SLF2Q8IX21 1173 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 TMTC2Q8N394 836 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 SPRYD3Q8NCJ5 442 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 SMARCC2Q8TAQ2 1214 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 GTF3C6Q969F1 213 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 EYA3Q99504 573 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 CRNKL1Q9BZJ0 848 aaKnown RBP8.86□□□□□ -0.99
ERCC3-204ENST00000456257 KRT23Q9C075 422 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 NAPBQ9H115 298 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 ZSWIM5Q9P217 1185 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 TAOK2Q9UL54 1235 aa8.86□□□□□ -0.99
ERCC3-204ENST00000456257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
ERCC3-204ENST00000456257 PLCG2P16885 1265 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 CHRNA5P30532 468 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 RHBDL3P58872 404 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 DYNLL1P63167 89 aaKnown RBP8.85□□□□□ -0.99
ERCC3-204ENST00000456257 KIAA2012Q0VF49 1180 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 STRIP1Q5VSL9 837 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 HHIPL2Q6UWX4 724 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 CYB5R4Q7L1T6 521 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 RTKN2Q8IZC4 609 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 TTLL6Q8N841 843 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 MIGA1Q8NAN2 632 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 SUPT20HQ8NEM7 779 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 ANKS1AQ92625 1134 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.998e-7■■□□□ 13
ERCC3-204ENST00000456257 PSMD1Q99460 953 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 RNF41Q9H4P4 317 aaPredicted RBP8.85□□□□□ -0.99
ERCC3-204ENST00000456257 DCP1AQ9NPI6 582 aaPredicted RBP8.85□□□□□ -0.99
ERCC3-204ENST00000456257 HPS5Q9UPZ3 1129 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 NID2Q14112 1375 aa8.85□□□□□ -0.99
ERCC3-204ENST00000456257 MROH7-TTC4A0A0A0MT08 1334 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 PRC1O43663 620 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 CTDNEP1O95476 244 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 BAG3O95817 575 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 APPP05067 770 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 SYT1P21579 422 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 HAND2P61296 217 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 PPARAQ07869 468 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 TRDNQ13061 729 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 CHAF1AQ13111 956 aaPredicted RBP8.84□□□□□ -0.99
ERCC3-204ENST00000456257 SEC23AQ15436 765 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 C12orf60Q5U649 245 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 OLFM4Q6UX06 510 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 MFSD6Q6ZSS7 791 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 CERS5Q8N5B7 392 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.99
ERCC3-204ENST00000456257 BRF1Q92994 677 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 GPR101Q96P66 508 aaPredicted RBP8.84□□□□□ -0.99
ERCC3-204ENST00000456257 LARP6Q9BRS8 491 aaKnown RBP8.84□□□□□ -0.99
ERCC3-204ENST00000456257 MTFR1LQ9H019 292 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 TMX4Q9H1E5 349 aaPredicted RBP8.84□□□□□ -0.99
ERCC3-204ENST00000456257 BRPF3Q9ULD4 1205 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 SMC3Q9UQE7 1217 aa8.84□□□□□ -0.99
ERCC3-204ENST00000456257 WDR33Q9C0J8 1336 aaKnown RBP8.83□□□□□ -1
ERCC3-204ENST00000456257 USP17L12C9JPN9 530 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 USP17L21D6R901 530 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 SH2B2O14492 632 aaPredicted RBP8.83□□□□□ -1
ERCC3-204ENST00000456257 BAG4O95429 457 aaKnown RBP8.83□□□□□ -1
ERCC3-204ENST00000456257 PDCP20941 246 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 PTMSP20962 102 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 NOVP48745 357 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 GTF2IP78347 998 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 PKP1Q13835 747 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 PPP2R5BQ15173 497 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 MFSD14BQ5SR56 506 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 DACT2Q5SW24 774 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 SOGA3Q5TF21 947 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 DZIP1Q86YF9 867 aaKnown RBP8.83□□□□□ -1
ERCC3-204ENST00000456257 CCDC83Q8IWF9 413 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 NECAB1Q8N987 351 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 TCEANC2Q96MN5 208 aa8.83□□□□□ -1
ERCC3-204ENST00000456257 LY9Q9HBG7 655 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms