RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 PDE4AP27815 886 aa17.69■□□□□ 0.42
NCKIPSD-207ENST00000453349 BTDP43251 543 aa17.69■□□□□ 0.42
NCKIPSD-207ENST00000453349 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
NCKIPSD-207ENST00000453349 ZNF384Q8TF68 577 aa17.69■□□□□ 0.42
NCKIPSD-207ENST00000453349 TRIM6-TRIM34B2RNG4 842 aa17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 ITGBL1O95965 494 aaPredicted RBP17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 TNNI2P48788 182 aa17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 GLIS2Q9BZE0 524 aaPredicted RBP17.68■□□□□ 0.42
NCKIPSD-207ENST00000453349 MYH2Q9UKX2 1941 aa17.67■□□□□ 0.42
NCKIPSD-207ENST00000453349 TCP10L2B9ZVM9 353 aa17.67■□□□□ 0.42
NCKIPSD-207ENST00000453349 PDE6AP16499 860 aa17.67■□□□□ 0.42
NCKIPSD-207ENST00000453349 PLCG2P16885 1265 aa17.67■□□□□ 0.42
NCKIPSD-207ENST00000453349 ZFYP08048 801 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 ADD2P35612 726 aa17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 C1QTNF8P60827 252 aa17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 CERS3Q8IU89 383 aa17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 FSD1Q9BTV5 496 aa17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 AATFQ9NY61 560 aaKnown RBP eCLIP17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 SCAF8Q9UPN6 1271 aaKnown RBP17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 ZNF532Q9HCE3 1301 aa17.66■□□□□ 0.42
NCKIPSD-207ENST00000453349 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 PPP4CP60510 307 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 UBE3CQ15386 1083 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 FKBP1CQ5VVH2 108 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 DEFB129Q9H1M3 183 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 PPP2R3BQ9Y5P8 575 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 ECM29Q5VYK3 1845 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 DOCK2Q92608 1830 aa17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 MYO5AQ9Y4I1 1855 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-207ENST00000453349 MAST2Q6P0Q8 1798 aa17.64■□□□□ 0.41
NCKIPSD-207ENST00000453349 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
NCKIPSD-207ENST00000453349 RNF113AO15541 343 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-207ENST00000453349 CACNB3P54284 484 aa17.64■□□□□ 0.41
NCKIPSD-207ENST00000453349 RASA3Q14644 834 aa17.64■□□□□ 0.41
NCKIPSD-207ENST00000453349 ADGRA1Q86SQ6 560 aa17.64■□□□□ 0.41
NCKIPSD-207ENST00000453349 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
NCKIPSD-207ENST00000453349 TCRBV5S4A2TA0A5A2 114 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 TRAF5O00463 557 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 NF2P35240 595 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 RHBDL3P58872 404 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 TTC22Q5TAA0 569 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 TICAM2Q86XR7 235 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 TEX11Q8IYF3 940 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 ZNF408Q9H9D4 720 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 PASKQ96RG2 1323 aa17.63■□□□□ 0.41
NCKIPSD-207ENST00000453349 DYNLL1P63167 89 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-207ENST00000453349 TCP10Q12799 353 aa17.62■□□□□ 0.41
NCKIPSD-207ENST00000453349 SUPT20HL1Q3ZLR7 823 aa17.62■□□□□ 0.41
NCKIPSD-207ENST00000453349 PRAMEF18Q5VWM3 479 aa17.62■□□□□ 0.41
NCKIPSD-207ENST00000453349 SH3RF3Q8TEJ3 882 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-207ENST00000453349 FAM151AQ8WW52 585 aa17.62■□□□□ 0.41
NCKIPSD-207ENST00000453349 CDCA5Q96FF9 252 aa17.62■□□□□ 0.41
NCKIPSD-207ENST00000453349 ENTPD3O75355 529 aa17.61■□□□□ 0.41
NCKIPSD-207ENST00000453349 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
NCKIPSD-207ENST00000453349 PICALMQ13492 652 aa17.61■□□□□ 0.41
NCKIPSD-207ENST00000453349 DLK2Q6UY11 383 aa17.61■□□□□ 0.41
NCKIPSD-207ENST00000453349 APPBP2Q92624 585 aa17.61■□□□□ 0.41
NCKIPSD-207ENST00000453349 POLR2AP24928 1970 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 CELF2O95319 508 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 USP5P45974 858 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 RGS3P49796 1198 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 APLP1P51693 650 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 TGFBRAP1Q8WUH2 860 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 AIDAQ96BJ3 306 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 HOOK2Q96ED9 719 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 TMEM39BQ9GZU3 492 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
NCKIPSD-207ENST00000453349 CNTNAP1P78357 1384 aa17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 TMEM88BA6NKF7 163 aa17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 WDHD1O75717 1129 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 CHGBP05060 677 aa17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 NFIAQ12857 509 aa17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 C2orf69Q8N8R5 385 aa17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 RIOK1Q9BRS2 568 aaKnown RBP17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 CRNKL1Q9BZJ0 848 aaKnown RBP17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 PUS7LQ9H0K6 701 aaKnown RBP17.59■□□□□ 0.41
NCKIPSD-207ENST00000453349 HIP1O00291 1037 aa17.58■□□□□ 0.4
NCKIPSD-207ENST00000453349 MBD4O95243 580 aa17.58■□□□□ 0.4
NCKIPSD-207ENST00000453349 SDSP20132 328 aa17.58■□□□□ 0.4
NCKIPSD-207ENST00000453349 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-207ENST00000453349 CST9Q5W186 159 aa17.58■□□□□ 0.4
NCKIPSD-207ENST00000453349 ARMT1Q9H993 441 aa17.58■□□□□ 0.4
NCKIPSD-207ENST00000453349 DDX4Q9NQI0 724 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-207ENST00000453349 GSPT1P15170 499 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-207ENST00000453349 TTLL12Q14166 644 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-207ENST00000453349 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
NCKIPSD-207ENST00000453349 LCORLQ8N3X6 602 aa17.57■□□□□ 0.4
NCKIPSD-207ENST00000453349 OSBP2Q969R2 916 aa17.57■□□□□ 0.4
NCKIPSD-207ENST00000453349 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
NCKIPSD-207ENST00000453349 HELLSQ9NRZ9 838 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms