RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 ROBO1Q9Y6N7 1651 aa8.86□□□□□ -0.99
LINC00458-203ENST00000451744 PIP4K2BP78356 416 aa8.86□□□□□ -0.99
LINC00458-203ENST00000451744 FKBP5Q13451 457 aaPredicted RBP8.86□□□□□ -0.99
LINC00458-203ENST00000451744 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
LINC00458-203ENST00000451744 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
LINC00458-203ENST00000451744 DZIP1LQ8IYY4 767 aaKnown RBP8.86□□□□□ -0.99
LINC00458-203ENST00000451744 MRPL18Q9H0U6 180 aaKnown RBP8.86□□□□□ -0.99
LINC00458-203ENST00000451744 F8W735 103 aaPredicted RBP8.85□□□□□ -0.99
LINC00458-203ENST00000451744 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.85□□□□□ -0.99
LINC00458-203ENST00000451744 KRTAP4-12Q9BQ66 201 aa8.85□□□□□ -0.99
LINC00458-203ENST00000451744 KNDC1Q76NI1 1749 aa8.85□□□□□ -0.99
LINC00458-203ENST00000451744 NRXN1Q9ULB1 1477 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 PIK3C2GO75747 1445 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 FSTP19883 344 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 PBXIP1Q96AQ6 731 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 PRIMPOLQ96LW4 560 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 RBSNQ9H1K0 784 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 TRIM33Q9UPN9 1127 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 TBX22Q9Y458 520 aa8.84□□□□□ -0.99
LINC00458-203ENST00000451744 MYOM2P54296 1465 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 HOXD8P13378 290 aaPredicted RBP8.83□□□□□ -1
LINC00458-203ENST00000451744 RFX1P22670 979 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 SOX18P35713 384 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 SETDB1Q15047 1291 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 ETFBKMTQ8IXQ9 262 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 TMEM130Q8N3G9 435 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 USTQ9Y2C2 406 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 RGPD8O14715 1765 aaPredicted RBP8.83□□□□□ -1
LINC00458-203ENST00000451744 DHX57Q6P158 1386 aaKnown RBP8.83□□□□□ -1
LINC00458-203ENST00000451744 ROBO2Q9HCK4 1378 aa8.83□□□□□ -1
LINC00458-203ENST00000451744 TRIP4Q15650 581 aaPredicted RBP8.82□□□□□ -1
LINC00458-203ENST00000451744 AGGF1Q8N302 714 aaeCLIP8.82□□□□□ -1
LINC00458-203ENST00000451744 SAP130Q9H0E3 1048 aa8.82□□□□□ -1
LINC00458-203ENST00000451744 SRA1Q9HD15 236 aaKnown RBP8.82□□□□□ -1
LINC00458-203ENST00000451744 NOVA2Q9UNW9 492 aaKnown RBP8.82□□□□□ -1
LINC00458-203ENST00000451744 PLEKHH1Q9ULM0 1364 aa8.82□□□□□ -1
LINC00458-203ENST00000451744 LAMC1P11047 1609 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 PRMT3O60678 531 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 HSPA1LP34931 641 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 TMEM132EQ6IEE7 984 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 NLRP13Q86W25 1043 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 SIN3AQ96ST3 1273 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 PCMTD2Q9NV79 361 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 PIK3R4Q99570 1358 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 ADGRB1O14514 1584 aa8.81□□□□□ -1
LINC00458-203ENST00000451744 PHLPP1O60346 1717 aa8.8□□□□□ -1
LINC00458-203ENST00000451744 ARHGEF28Q8N1W1 1705 aaKnown RBP8.8□□□□□ -1
LINC00458-203ENST00000451744 GLB1P16278 677 aa8.8□□□□□ -1
LINC00458-203ENST00000451744 SSTR4P31391 388 aa8.8□□□□□ -1
LINC00458-203ENST00000451744 TMCO4Q5TGY1 634 aa8.8□□□□□ -1
LINC00458-203ENST00000451744 MAP4K3Q8IVH8 894 aa8.8□□□□□ -1
LINC00458-203ENST00000451744 PTCH1Q13635 1447 aa8.8□□□□□ -1
LINC00458-203ENST00000451744 RPGRIP1LQ68CZ1 1315 aa8.8□□□□□ -1
LINC00458-203ENST00000451744 FAM26DQ5JW98 314 aa8.79□□□□□ -1
LINC00458-203ENST00000451744 Q6ZS46 218 aa8.79□□□□□ -1
LINC00458-203ENST00000451744 STK26Q9P289 416 aa8.79□□□□□ -1
LINC00458-203ENST00000451744 MSH6P52701 1360 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 BRD2P25440 801 aaKnown RBP8.78□□□□□ -1
LINC00458-203ENST00000451744 SWI5Q1ZZU3 235 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 C16orf46Q6P387 395 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 DCAF11Q8TEB1 546 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 PPME1Q9Y570 386 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 COL16A1Q07092 1604 aaPredicted RBP8.78□□□□□ -1
LINC00458-203ENST00000451744 MST1RQ04912 1400 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 PRAG1Q86YV5 1406 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 YTHDC2Q9H6S0 1430 aaKnown RBP8.78□□□□□ -1
LINC00458-203ENST00000451744 ADGRL3Q9HAR2 1447 aa8.78□□□□□ -1
LINC00458-203ENST00000451744 MED1Q15648 1581 aaPredicted RBP8.78□□□□□ -1
LINC00458-203ENST00000451744 FMN2Q9NZ56 1722 aa8.77□□□□□ -1
LINC00458-203ENST00000451744 NHSL1Q5SYE7 1610 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 TOM1O60784 492 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 ATP11AP98196 1134 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 KCNA1Q09470 495 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 OCLNQ16625 522 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 COL13A1Q5TAT6 717 aaPredicted RBP8.77□□□□□ -1.01
LINC00458-203ENST00000451744 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.77□□□□□ -1.01
LINC00458-203ENST00000451744 WAPLQ7Z5K2 1190 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 SLC51AQ86UW1 340 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 GALNT11Q8NCW6 608 aa8.77□□□□□ -1.01
LINC00458-203ENST00000451744 LRPPRCP42704 1394 aaKnown RBP8.76□□□□□ -1.01
LINC00458-203ENST00000451744 LINC01387J3KSC0 135 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 MCTP1Q6DN14 999 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 TXNDC11Q6PKC3 985 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 CACTIN-AS1Q8N1I8 211 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 OR13H1Q8NG92 308 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
LINC00458-203ENST00000451744 MKNK1Q9BUB5 465 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 LACRTQ9GZZ8 138 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 MUC3BQ9H195 1237 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 ZMIZ1Q9ULJ6 1067 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 RAXQ9Y2V3 346 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 TECPR2O15040 1411 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 CDC42BPGQ6DT37 1551 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 KIAA1210Q9ULL0 1709 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 TRPM1Q7Z4N2 1603 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 USP32Q8NFA0 1604 aa8.76□□□□□ -1.01
LINC00458-203ENST00000451744 TNFRSF10BO14763 440 aa8.75□□□□□ -1.01
LINC00458-203ENST00000451744 WISP1O95388 367 aa8.75□□□□□ -1.01
LINC00458-203ENST00000451744 BRD1O95696 1058 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms