RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 CLIC6Q96NY7 704 aa13.33□□□□□ -0.28
TNXB-203ENST00000451343 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
TNXB-203ENST00000451343 CIAO1O76071 339 aa13.33□□□□□ -0.28
TNXB-203ENST00000451343 SYT10Q6XYQ8 523 aa13.33□□□□□ -0.28
TNXB-203ENST00000451343 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
TNXB-203ENST00000451343 APPBP2Q92624 585 aa13.33□□□□□ -0.28
TNXB-203ENST00000451343 DPF2Q92785 391 aa13.33□□□□□ -0.28
TNXB-203ENST00000451343 COL18A1P39060 1754 aa13.32□□□□□ -0.28
TNXB-203ENST00000451343 YEATS4O95619 227 aa13.32□□□□□ -0.28
TNXB-203ENST00000451343 MCAMP43121 646 aa13.32□□□□□ -0.28
TNXB-203ENST00000451343 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
TNXB-203ENST00000451343 PPP1R13BQ96KQ4 1090 aa13.32□□□□□ -0.28
TNXB-203ENST00000451343 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 IDH1O75874 414 aaKnown RBP13.31□□□□□ -0.28
TNXB-203ENST00000451343 CDC27P30260 824 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 NLRP12P59046 1061 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 PNOCQ13519 176 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 SPECC1Q5M775 1068 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 FBXO38Q6PIJ6 1188 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 PSMD1Q99460 953 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 OSBPL5Q9H0X9 879 aaPredicted RBP13.31□□□□□ -0.28
TNXB-203ENST00000451343 OGFRQ9NZT2 677 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 B4E1Z4 1266 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 METTL24Q5JXM2 366 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 VPS37DQ86XT2 251 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 KIF18AQ8NI77 898 aa13.31□□□□□ -0.28
TNXB-203ENST00000451343 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
TNXB-203ENST00000451343 SFPQP23246 707 aaKnown RBP eCLIP13.3□□□□□ -0.28
TNXB-203ENST00000451343 GSDMDP57764 484 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 FANCCQ00597 558 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 SYCP1Q15431 976 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 ISCA1Q9BUE6 129 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 PRDM16Q9HAZ2 1276 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 DDX41Q9UJV9 622 aaKnown RBP13.3□□□□□ -0.28
TNXB-203ENST00000451343 IL2RBP14784 551 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
TNXB-203ENST00000451343 TCIRG1Q13488 830 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 GNL2Q13823 731 aaKnown RBP13.3□□□□□ -0.28
TNXB-203ENST00000451343 KRT40Q6A162 431 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 SHC4Q6S5L8 630 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 BRAPQ7Z569 592 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 FEZ1Q99689 392 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 HSD3B7Q9H2F3 369 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 PIH1D3Q9NQM4 214 aaKnown RBP13.3□□□□□ -0.28
TNXB-203ENST00000451343 SYKP43405 635 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
TNXB-203ENST00000451343 TAF3Q5VWG9 929 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 GREM2Q9H772 168 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 ST7Q9NRC1 585 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
TNXB-203ENST00000451343 LAMB4A4D0S4 1761 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 PCDH11XQ9BZA7 1347 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 PCDH11YQ9BZA8 1340 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 NUP188Q5SRE5 1749 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 TMEM232C9JQI7 657 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 SNAP23O00161 211 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 FOXN1O15353 648 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 ZFYP08048 801 aaPredicted RBP13.29□□□□□ -0.28
TNXB-203ENST00000451343 CMA1P23946 247 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 ERCC6LQ2NKX8 1250 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 HELBQ8NG08 1087 aaPredicted RBP13.29□□□□□ -0.28
TNXB-203ENST00000451343 SLU7O95391 586 aaKnown RBP13.29□□□□□ -0.28
TNXB-203ENST00000451343 LDHAL6AQ6ZMR3 332 aa13.29□□□□□ -0.28
TNXB-203ENST00000451343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
TNXB-203ENST00000451343 GTPBP4Q9BZE4 634 aaKnown RBP13.29□□□□□ -0.28
TNXB-203ENST00000451343 TRDNQ13061 729 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 SLC39A14Q15043 492 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 HLFQ16534 295 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 FBXL16Q8N461 479 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 ZNF397Q8NF99 534 aaPredicted RBP13.28□□□□□ -0.28
TNXB-203ENST00000451343 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 ANGEL1Q9UNK9 670 aaKnown RBP13.28□□□□□ -0.28
TNXB-203ENST00000451343 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 PKD1L3Q7Z443 1732 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 RIC1Q4ADV7 1423 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 NFXL1Q6ZNB6 911 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 RANBP6O60518 1105 aaKnown RBP13.28□□□□□ -0.28
TNXB-203ENST00000451343 ITGA6P23229 1130 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 IRX5P78411 483 aaPredicted RBP13.28□□□□□ -0.28
TNXB-203ENST00000451343 LRRFIP1Q32MZ4 808 aaKnown RBP13.28□□□□□ -0.28
TNXB-203ENST00000451343 APOA5Q6Q788 366 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 TMX1Q9H3N1 280 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 IMPACTQ9P2X3 320 aa13.28□□□□□ -0.28
TNXB-203ENST00000451343 ZNF532Q9HCE3 1301 aa13.27□□□□□ -0.28
TNXB-203ENST00000451343 SH2B2O14492 632 aaPredicted RBP13.27□□□□□ -0.28
TNXB-203ENST00000451343 SERPINC1P01008 464 aa13.27□□□□□ -0.28
TNXB-203ENST00000451343 ADD2P35612 726 aa13.27□□□□□ -0.28
TNXB-203ENST00000451343 PHKA1P46020 1223 aa13.27□□□□□ -0.28
TNXB-203ENST00000451343 FAM177A1Q8N128 213 aaPredicted RBP13.27□□□□□ -0.28
TNXB-203ENST00000451343 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.28
TNXB-203ENST00000451343 BPIFA3Q9BQP9 254 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms