RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 TICAM2Q86XR7 235 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 LCORLQ8N3X6 602 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 PRMT6Q96LA8 375 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 ARMT1Q9H993 441 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 HACL1Q9UJ83 578 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 BAZ2AQ9UIF9 1905 aaKnown RBP21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 SPDYE2BA6NHP3 402 aa21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 SPDYE6P0CI01 402 aa21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 KIF4BQ2VIQ3 1234 aa21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 TMED8Q6PL24 325 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 SH3RF3Q8TEJ3 882 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 ZBED3Q96IU2 234 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 NOL10Q9BSC4 688 aaKnown RBP21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 HELLSQ9NRZ9 838 aa21.65■■□□□ 1.06
TRAPPC4-203ENST00000447216 NBPF9Q3BBW0 867 aa21.64■■□□□ 1.05
TRAPPC4-203ENST00000447216 MCMDC2Q4G0Z9 681 aa21.64■■□□□ 1.05
TRAPPC4-203ENST00000447216 ZNF589Q86UQ0 364 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC4-203ENST00000447216 MTMR14Q8NCE2 650 aa21.64■■□□□ 1.05
TRAPPC4-203ENST00000447216 AIDAQ96BJ3 306 aa21.64■■□□□ 1.05
TRAPPC4-203ENST00000447216 RIOK1Q9BRS2 568 aaKnown RBP21.64■■□□□ 1.05
TRAPPC4-203ENST00000447216 TDRD3Q9H7E2 651 aaKnown RBP21.64■■□□□ 1.05
TRAPPC4-203ENST00000447216 MYH1P12882 1939 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 ASTN2O75129 1339 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 NAV1Q8NEY1 1877 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 WNT10BO00744 389 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 GPAA1O43292 621 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 BAG3O95817 575 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 MMP14P50281 582 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 HIRAP54198 1017 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 PPP4CP60510 307 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 CDC42EP5Q6NZY7 148 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 RUFY2Q8WXA3 655 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 ESYT1Q9BSJ8 1104 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 RRAGCQ9HB90 399 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 ADARB2Q9NS39 739 aaKnown RBP21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 USP40Q9NVE5 1235 aa21.63■■□□□ 1.05
TRAPPC4-203ENST00000447216 CLRN2A0PK11 232 aa21.62■■□□□ 1.05
TRAPPC4-203ENST00000447216 EPHX2P34913 555 aa21.62■■□□□ 1.05
TRAPPC4-203ENST00000447216 RHBDL3P58872 404 aa21.62■■□□□ 1.05
TRAPPC4-203ENST00000447216 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
TRAPPC4-203ENST00000447216 STRBPQ96SI9 672 aaKnown RBP21.62■■□□□ 1.05
TRAPPC4-203ENST00000447216 TAF1DQ9H5J8 278 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC4-203ENST00000447216 NMRK2Q9NPI5 230 aa21.62■■□□□ 1.05
TRAPPC4-203ENST00000447216 SGSM2O43147 1006 aa21.61■■□□□ 1.05
TRAPPC4-203ENST00000447216 PRKAB2O43741 272 aa21.61■■□□□ 1.05
TRAPPC4-203ENST00000447216 CACNB3P54284 484 aa21.61■■□□□ 1.05
TRAPPC4-203ENST00000447216 TEX11Q8IYF3 940 aa21.61■■□□□ 1.05
TRAPPC4-203ENST00000447216 CCDC171Q6TFL3 1326 aa21.6■■□□□ 1.05
TRAPPC4-203ENST00000447216 RAD50Q92878 1312 aa21.6■■□□□ 1.05
TRAPPC4-203ENST00000447216 IQCA1LA6NCM1 817 aa21.6■■□□□ 1.05
TRAPPC4-203ENST00000447216 ZNF70Q9UC06 446 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC4-203ENST00000447216 PLCG2P16885 1265 aa21.59■■□□□ 1.05
TRAPPC4-203ENST00000447216 SPDYE2Q495Y8 402 aa21.59■■□□□ 1.05
TRAPPC4-203ENST00000447216 C8orf34Q49A92 452 aa21.59■■□□□ 1.05
TRAPPC4-203ENST00000447216 VPS53Q5VIR6 699 aa21.59■■□□□ 1.05
TRAPPC4-203ENST00000447216 SLC4A4Q9Y6R1 1079 aa21.59■■□□□ 1.05
TRAPPC4-203ENST00000447216 VEGFAP15692 232 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC4-203ENST00000447216 EAPPQ56P03 285 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC4-203ENST00000447216 TGFBRAP1Q8WUH2 860 aa21.58■■□□□ 1.05
TRAPPC4-203ENST00000447216 SDR42E1Q8WUS8 393 aa21.58■■□□□ 1.05
TRAPPC4-203ENST00000447216 CRNKL1Q9BZJ0 848 aaKnown RBP21.58■■□□□ 1.05
TRAPPC4-203ENST00000447216 VEZTQ9HBM0 779 aa21.58■■□□□ 1.05
TRAPPC4-203ENST00000447216 SCAF8Q9UPN6 1271 aaKnown RBP21.58■■□□□ 1.05
TRAPPC4-203ENST00000447216 MYO1BO43795 1136 aa21.57■■□□□ 1.04
TRAPPC4-203ENST00000447216 WDHD1O75717 1129 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC4-203ENST00000447216 NFIAQ12857 509 aa21.57■■□□□ 1.04
TRAPPC4-203ENST00000447216 USP50Q70EL3 339 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC4-203ENST00000447216 MAPKAPK5Q8IW41 473 aa21.57■■□□□ 1.04
TRAPPC4-203ENST00000447216 DDX4Q9NQI0 724 aaKnown RBP21.57■■□□□ 1.04
TRAPPC4-203ENST00000447216 DDX60LQ5H9U9 1706 aaKnown RBP21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 TCP10L2B9ZVM9 353 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 FOXP2O15409 715 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 USP5P45974 858 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 MFAP1P55081 439 aaKnown RBP21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 PTH1RQ03431 593 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 PICALMQ13492 652 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 CERS3Q8IU89 383 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 GGA3Q9NZ52 723 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 TMOD2Q9NZR1 351 aa21.56■■□□□ 1.04
TRAPPC4-203ENST00000447216 GSG1L2A8MUP6 293 aa21.55■■□□□ 1.04
TRAPPC4-203ENST00000447216 POTEIP0CG38 1075 aa21.55■■□□□ 1.04
TRAPPC4-203ENST00000447216 POTEJP0CG39 1038 aa21.55■■□□□ 1.04
TRAPPC4-203ENST00000447216 ANGEL2Q5VTE6 544 aaKnown RBP21.55■■□□□ 1.04
TRAPPC4-203ENST00000447216 EPB41L4AQ9HCS5 686 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC4-203ENST00000447216 FAM198AQ9UFP1 575 aa21.55■■□□□ 1.04
TRAPPC4-203ENST00000447216 LAMB1P07942 1786 aa21.55■■□□□ 1.04
TRAPPC4-203ENST00000447216 APPP05067 770 aa21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 HSPD1P10809 573 aaKnown RBP21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 GNAT2P19087 354 aa21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 YY1P25490 414 aa21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 TCP10Q12799 353 aa21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 ZFPM1Q8IX07 1006 aa21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 ANO2Q9NQ90 1003 aa21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 SAP30BPQ9UHR5 308 aaKnown RBP21.54■■□□□ 1.04
TRAPPC4-203ENST00000447216 PATL2C9JE40 543 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-203ENST00000447216 SEC24BO95487 1268 aa21.53■■□□□ 1.04
TRAPPC4-203ENST00000447216 IDI2Q9BXS1 227 aa21.53■■□□□ 1.04
TRAPPC4-203ENST00000447216 LSG1Q9H089 658 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-203ENST00000447216 FLT1P17948 1338 aa21.53■■□□□ 1.04
TRAPPC4-203ENST00000447216 LAMA4Q16363 1823 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms