RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 HPS5Q9UPZ3 1129 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 LY75O60449 1722 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 NASPP49321 788 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 TTC6Q86TZ1 520 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 GPR101Q96P66 508 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 TACC3Q9Y6A5 838 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 MYH7P12883 1935 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 WDR19Q8NEZ3 1342 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 GOLGA6L4A6NEF3 574 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 SH2B2O14492 632 aaPredicted RBP11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 SEMA3EO15041 775 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 FDPSP14324 419 aaKnown RBP11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 MECOMQ03112 1051 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 RESTQ13127 1097 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 SPATA32Q96LK8 384 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 KRT23Q9C075 422 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 RBSNQ9H1K0 784 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 ZSCAN16Q9H4T2 348 aaPredicted RBP11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
COL6A4P1-201ENST00000446690 APBA3O96018 575 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 PRDX5P30044 214 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 ADD1P35611 737 aaKnown RBP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 METAP2P50579 478 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 PPARAQ07869 468 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 MICU3Q86XE3 530 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 ZNF384Q8TF68 577 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 NSUN4Q96CB9 384 aaKnown RBP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 TMEM87BQ96K49 555 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 RIOK1Q9BRS2 568 aaKnown RBP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 MYL10Q9BUA6 226 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 SCAND2PQ9GZW5 306 aaPredicted RBP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 CNNM2Q9H8M5 875 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 TAF1LQ8IZX4 1826 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 RBM6P78332 1123 aaKnown RBP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 RBM17Q96I25 401 aaKnown RBP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 ORC3Q9UBD5 711 aaPredicted RBP11.15□□□□□ -0.62
COL6A4P1-201ENST00000446690 SALL1Q9NSC2 1324 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 CYP2D7A0A087X1C5 515 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 SMIM22K7EJ46 135 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 GPSM2P81274 684 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 DDR1Q08345 913 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 CCDC183Q5T5S1 534 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 ZNF772Q68DY9 489 aaPredicted RBP11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 RNF214Q8ND24 703 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 STAG1Q8WVM7 1258 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 ANP32BQ92688 251 aaKnown RBP11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 LY9Q9HBG7 655 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 LEMD3Q9Y2U8 911 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 SLC12A7Q9Y666 1083 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 XDHP47989 1333 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 ERICH2A1L162 156 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 ZBTB43O43298 467 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 APOA5Q6Q788 366 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 SYNE3Q6ZMZ3 975 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 DZIP1Q86YF9 867 aaKnown RBP11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 LEO1Q8WVC0 666 aaPredicted RBP11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 C8orf76Q96K31 380 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 RNF41Q9H4P4 317 aaPredicted RBP11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 GJB4Q9NTQ9 266 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 CFAP45Q9UL16 551 aa11.14□□□□□ -0.63
COL6A4P1-201ENST00000446690 COL24A1Q17RW2 1714 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 SART3Q15020 963 aaKnown RBP11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 TSPY26PQ9H489 355 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 C4AP0C0L4 1744 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 POLRMTO00411 1230 aaKnown RBP11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 UFL1O94874 794 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 CDC27P30260 824 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 WTAPQ15007 396 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 SLC4A8Q2Y0W8 1093 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 PHKBQ93100 1093 aa11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 FTOQ9C0B1 505 aaKnown RBP eCLIP11.13□□□□□ -0.63
COL6A4P1-201ENST00000446690 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 USP17L21D6R901 530 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 PRDM1O75626 825 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 CRY2Q49AN0 593 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 ELP1O95163 1332 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 TCHHQ07283 1943 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 RANBP6O60518 1105 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 CDKL5O76039 1030 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 LDHBP07195 334 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 LIG1P18858 919 aa11.12□□□□□ -0.63
COL6A4P1-201ENST00000446690 LIFRP42702 1097 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms