RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SH3RF3Q8TEJ3 882 aaPredicted RBP20.89■□□□□ 0.94
SGCE-206ENST00000445866 EGFRP00533 1210 aa20.89■□□□□ 0.93
SGCE-206ENST00000445866 NBPF9Q3BBW0 867 aa20.89■□□□□ 0.93
SGCE-206ENST00000445866 C8orf34Q49A92 452 aa20.89■□□□□ 0.93
SGCE-206ENST00000445866 KIAA1211Q6ZU35 1233 aa20.89■□□□□ 0.93
SGCE-206ENST00000445866 CERS3Q8IU89 383 aa20.89■□□□□ 0.93
SGCE-206ENST00000445866 IL25Q9H293 177 aa20.89■□□□□ 0.93
SGCE-206ENST00000445866 TDRD3Q9H7E2 651 aaKnown RBP20.89■□□□□ 0.93
SGCE-206ENST00000445866 ADARB2Q9NS39 739 aaKnown RBP20.89■□□□□ 0.93
SGCE-206ENST00000445866 WNT10BO00744 389 aa20.88■□□□□ 0.93
SGCE-206ENST00000445866 APPP05067 770 aa20.88■□□□□ 0.93
SGCE-206ENST00000445866 KIF4BQ2VIQ3 1234 aa20.88■□□□□ 0.93
SGCE-206ENST00000445866 TEX11Q8IYF3 940 aa20.88■□□□□ 0.93
SGCE-206ENST00000445866 CRNKL1Q9BZJ0 848 aaKnown RBP20.88■□□□□ 0.93
SGCE-206ENST00000445866 SLC4A4Q9Y6R1 1079 aa20.88■□□□□ 0.93
SGCE-206ENST00000445866 IQCA1LA6NCM1 817 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 PRKAB2O43741 272 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 MYO1BO43795 1136 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 RHBDL3P58872 404 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 ZBED3Q96IU2 234 aaPredicted RBP20.87■□□□□ 0.93
SGCE-206ENST00000445866 RRAGCQ9HB90 399 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 CCDC171Q6TFL3 1326 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 RAD50Q92878 1312 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 AKAP11Q9UKA4 1901 aa20.87■□□□□ 0.93
SGCE-206ENST00000445866 PATL2C9JE40 543 aaKnown RBP20.86■□□□□ 0.93
SGCE-206ENST00000445866 GNAT2P19087 354 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 EPHX2P34913 555 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 TRPM4Q8TD43 1214 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 ZNF526Q8TF50 670 aaPredicted RBP20.86■□□□□ 0.93
SGCE-206ENST00000445866 CLRN2A0PK11 232 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 POTECB2RU33 542 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 VPS53Q5VIR6 699 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 TGFBRAP1Q8WUH2 860 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 ANO2Q9NQ90 1003 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 ZNF70Q9UC06 446 aaPredicted RBP20.86■□□□□ 0.93
SGCE-206ENST00000445866 SCN9AQ15858 1988 aa20.86■□□□□ 0.93
SGCE-206ENST00000445866 CHD4Q14839 1912 aa20.85■□□□□ 0.93
SGCE-206ENST00000445866 VEGFAP15692 232 aaPredicted RBP20.85■□□□□ 0.93
SGCE-206ENST00000445866 USP5P45974 858 aa20.85■□□□□ 0.93
SGCE-206ENST00000445866 HIRAP54198 1017 aaPredicted RBP20.85■□□□□ 0.93
SGCE-206ENST00000445866 TMOD2Q9NZR1 351 aa20.85■□□□□ 0.93
SGCE-206ENST00000445866 EIF5BO60841 1220 aaKnown RBP20.84■□□□□ 0.93
SGCE-206ENST00000445866 HSPD1P10809 573 aaKnown RBP20.84■□□□□ 0.93
SGCE-206ENST00000445866 CACNB3P54284 484 aa20.84■□□□□ 0.93
SGCE-206ENST00000445866 SDR42E1Q8WUS8 393 aa20.84■□□□□ 0.93
SGCE-206ENST00000445866 TAF1DQ9H5J8 278 aaPredicted RBP20.84■□□□□ 0.93
SGCE-206ENST00000445866 GSG1L2A8MUP6 293 aa20.83■□□□□ 0.93
SGCE-206ENST00000445866 REC8O95072 547 aa20.83■□□□□ 0.93
SGCE-206ENST00000445866 SEC24BO95487 1268 aa20.83■□□□□ 0.93
SGCE-206ENST00000445866 USP50Q70EL3 339 aaPredicted RBP20.83■□□□□ 0.93
SGCE-206ENST00000445866 NACAP1Q9BZK3 213 aa20.83■□□□□ 0.93
SGCE-206ENST00000445866 VEZTQ9HBM0 779 aa20.83■□□□□ 0.93
SGCE-206ENST00000445866 WDHD1O75717 1129 aaPredicted RBP20.83■□□□□ 0.92
SGCE-206ENST00000445866 PTH1RQ03431 593 aa20.83■□□□□ 0.92
SGCE-206ENST00000445866 PICALMQ13492 652 aa20.83■□□□□ 0.92
SGCE-206ENST00000445866 SPDYE2Q495Y8 402 aa20.83■□□□□ 0.92
SGCE-206ENST00000445866 EAPPQ56P03 285 aaPredicted RBP20.83■□□□□ 0.92
SGCE-206ENST00000445866 MAPKAPK5Q8IW41 473 aa20.83■□□□□ 0.92
SGCE-206ENST00000445866 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.92
SGCE-206ENST00000445866 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.92
SGCE-206ENST00000445866 TCP10L2B9ZVM9 353 aa20.82■□□□□ 0.92
SGCE-206ENST00000445866 PNMA8AQ86V59 439 aaPredicted RBP20.82■□□□□ 0.92
SGCE-206ENST00000445866 BACH2Q9BYV9 841 aa20.82■□□□□ 0.92
SGCE-206ENST00000445866 LSG1Q9H089 658 aaKnown RBP20.82■□□□□ 0.92
SGCE-206ENST00000445866 ASTN2O75129 1339 aaPredicted RBP20.82■□□□□ 0.92
SGCE-206ENST00000445866 NFIAQ12857 509 aa20.81■□□□□ 0.92
SGCE-206ENST00000445866 IFNL3Q8IZI9 196 aa20.81■□□□□ 0.92
SGCE-206ENST00000445866 DSCC1Q9BVC3 393 aa20.81■□□□□ 0.92
SGCE-206ENST00000445866 IDI2Q9BXS1 227 aa20.81■□□□□ 0.92
SGCE-206ENST00000445866 FGAP02671 866 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 TCP10Q12799 353 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 MAP4K1Q92918 833 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 NMRK2Q9NPI5 230 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 DCP1AQ9NPI6 582 aaPredicted RBP20.8■□□□□ 0.92
SGCE-206ENST00000445866 SBF1O95248 1867 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 FOXP2O15409 715 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 TDO2P48775 406 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 ANGEL2Q5VTE6 544 aaKnown RBP20.8■□□□□ 0.92
SGCE-206ENST00000445866 GIMAP6Q6P9H5 292 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 DDX4Q9NQI0 724 aaKnown RBP20.8■□□□□ 0.92
SGCE-206ENST00000445866 MCM9Q9NXL9 1143 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 FAM198AQ9UFP1 575 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 CLEC11AQ9Y240 323 aa20.8■□□□□ 0.92
SGCE-206ENST00000445866 ALX1Q15699 326 aa20.79■□□□□ 0.92
SGCE-206ENST00000445866 FKBP1CQ5VVH2 108 aa20.79■□□□□ 0.92
SGCE-206ENST00000445866 ZFPM1Q8IX07 1006 aa20.79■□□□□ 0.92
SGCE-206ENST00000445866 NAPBQ9H115 298 aa20.79■□□□□ 0.92
SGCE-206ENST00000445866 SAP30BPQ9UHR5 308 aaKnown RBP20.79■□□□□ 0.92
SGCE-206ENST00000445866 RPAP1Q9BWH6 1393 aaPredicted RBP20.79■□□□□ 0.92
SGCE-206ENST00000445866 ZC3H15Q8WU90 426 aaKnown RBP20.78■□□□□ 0.92
SGCE-206ENST00000445866 USP26Q9BXU7 913 aa20.78■□□□□ 0.92
SGCE-206ENST00000445866 EPB41L4AQ9HCS5 686 aaPredicted RBP20.78■□□□□ 0.92
SGCE-206ENST00000445866 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
SGCE-206ENST00000445866 MKRN1Q9UHC7 482 aaKnown RBP20.78■□□□□ 0.92
SGCE-206ENST00000445866 CTNNA3Q9UI47 895 aa20.78■□□□□ 0.92
SGCE-206ENST00000445866 SCAF8Q9UPN6 1271 aaKnown RBP20.78■□□□□ 0.92
SGCE-206ENST00000445866 U3KPZ7 1027 aaPredicted RBP20.78■□□□□ 0.92
SGCE-206ENST00000445866 USP17L12C9JPN9 530 aa20.77■□□□□ 0.92
SGCE-206ENST00000445866 USP17L21D6R901 530 aa20.77■□□□□ 0.92
SGCE-206ENST00000445866 POLR3DP05423 398 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms