RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 MTA3Q9BTC8 594 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 RNF41Q9H4P4 317 aaPredicted RBP22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 TFCP2L1Q9NZI6 479 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 ANKIB1Q9P2G1 1089 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 BRPF3Q9ULD4 1205 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 GOLGA8BA8MQT2 603 aa22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 POLRMTO00411 1230 aaKnown RBP22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 PRKAB2O43741 272 aa22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 HOXA10P31260 410 aaPredicted RBP22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 SPTY2D1Q68D10 685 aaPredicted RBP22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 CYB5R4Q7L1T6 521 aa22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 ADGRA1Q86SQ6 560 aa22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 DDX11Q96FC9 970 aa22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 GPHNQ9NQX3 736 aaPredicted RBP22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 LRRC37AA6NMS7 1700 aa22.15■■□□□ 1.14
SEMA3D-202ENST00000444867 ELP1O95163 1332 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 NEDD4P46934 1319 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 B4E1Z4 1266 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 GADD45BO75293 160 aaPredicted RBP22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 XRCC6P12956 609 aaKnown RBP eCLIP22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 GIMAP6Q6P9H5 292 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 MFSD6Q6ZSS7 791 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 RGS22Q8NE09 1264 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 NSUN4Q96CB9 384 aaKnown RBP22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 TMEM63CQ9P1W3 806 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 ANAPC4Q9UJX5 808 aa22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 NSFL1CQ9UNZ2 370 aaKnown RBP22.14■■□□□ 1.14
SEMA3D-202ENST00000444867 KLRG2A4D1S0 409 aaPredicted RBP22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 FIBPO43427 364 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 BBOX1O75936 387 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 DDR1Q08345 913 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 RESTQ13127 1097 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 GAS2L3Q86XJ1 694 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 FLAD1Q8NFF5 587 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 CRAMP1Q96RY5 1269 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 BRIP1Q9BX63 1249 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 NCOA5Q9HCD5 579 aaKnown RBP22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 HPS5Q9UPZ3 1129 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 ATP2B4P23634 1241 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 LIFRP42702 1097 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 TMC4Q7Z404 712 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 FERMT3Q86UX7 667 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 SGMS1Q86VZ5 419 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 KLHL34Q8N239 644 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 UPF1Q92900 1129 aaKnown RBP eCLIP22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 AKT1S1Q96B36 256 aa22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 RBM27Q9P2N5 1060 aaKnown RBP22.13■■□□□ 1.13
SEMA3D-202ENST00000444867 CTDSPL2Q05D32 466 aa22.12■■□□□ 1.13
SEMA3D-202ENST00000444867 ZNF804AQ7Z570 1209 aa22.12■■□□□ 1.13
SEMA3D-202ENST00000444867 NLGN1Q8N2Q7 840 aa22.12■■□□□ 1.13
SEMA3D-202ENST00000444867 WDR66Q8TBY9 1149 aa22.12■■□□□ 1.13
SEMA3D-202ENST00000444867 SCAND2PQ9GZW5 306 aaPredicted RBP22.12■■□□□ 1.13
SEMA3D-202ENST00000444867 LAMB1P07942 1786 aa22.12■■□□□ 1.13
SEMA3D-202ENST00000444867 ANKRD31Q8N7Z5 1873 aa22.12■■□□□ 1.13
SEMA3D-202ENST00000444867 PCP11498 1178 aaKnown RBP22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 MECOMQ03112 1051 aa22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 PPARAQ07869 468 aa22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 SF3B2Q13435 895 aaKnown RBP22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 TXNRD3Q86VQ6 643 aa22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 TDRD7Q8NHU6 1098 aaKnown RBP22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 IGDCC4Q8TDY8 1250 aa22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 ZNF384Q8TF68 577 aa22.11■■□□□ 1.13
SEMA3D-202ENST00000444867 APBA3O96018 575 aa22.1■■□□□ 1.13
SEMA3D-202ENST00000444867 BAZ2AQ9UIF9 1905 aaKnown RBP22.1■■□□□ 1.13
SEMA3D-202ENST00000444867 CPLX1O14810 134 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 CDKL5O76039 1030 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 CHAF1AQ13111 956 aaPredicted RBP22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 SART3Q15020 963 aaKnown RBP22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 TMEM67Q5HYA8 995 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 LRSAM1Q6UWE0 723 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 LY9Q9HBG7 655 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 PODXL2Q9NZ53 605 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 ZSWIM5Q9P217 1185 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 NID2Q14112 1375 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 KDM4AO75164 1064 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 GPSM2P81274 684 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 ZNF827Q17R98 1081 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 ATL3Q6DD88 541 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 CPLX2Q6PUV4 134 aaKnown RBP22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 APOA5Q6Q788 366 aa22.09■■□□□ 1.13
SEMA3D-202ENST00000444867 LTBP1Q14766 1721 aa22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 IFIT3O14879 490 aaKnown RBP22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 FDPSP14324 419 aaKnown RBP22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 METAP2P50579 478 aaKnown RBP eCLIP22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 DYNLL1P63167 89 aaKnown RBP22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 TMTC2Q8N394 836 aa22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 SDR42E1Q8WUS8 393 aa22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 CRNKL1Q9BZJ0 848 aaKnown RBP22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 GGA1Q9UJY5 639 aa22.08■■□□□ 1.13
SEMA3D-202ENST00000444867 ZBTB43O43298 467 aa22.07■■□□□ 1.12
SEMA3D-202ENST00000444867 LETM1O95202 739 aaPredicted RBP22.07■■□□□ 1.12
SEMA3D-202ENST00000444867 CCDC183Q5T5S1 534 aa22.07■■□□□ 1.12
SEMA3D-202ENST00000444867 NKX2-3Q8TAU0 364 aa22.07■■□□□ 1.12
SEMA3D-202ENST00000444867 CFAP45Q9UL16 551 aa22.07■■□□□ 1.12
SEMA3D-202ENST00000444867 TACC3Q9Y6A5 838 aa22.07■■□□□ 1.12
SEMA3D-202ENST00000444867 PRDX5P30044 214 aa22.06■■□□□ 1.12
SEMA3D-202ENST00000444867 RCAN1P53805 252 aa22.06■■□□□ 1.12
SEMA3D-202ENST00000444867 GSTO1P78417 241 aa22.06■■□□□ 1.12
SEMA3D-202ENST00000444867 NFXL1Q6ZNB6 911 aa22.06■■□□□ 1.12
SEMA3D-202ENST00000444867 TTC6Q86TZ1 520 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms