RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ILDR1Q86SU0 546 aaPredicted RBP18.4■□□□□ 0.54
SNX13-204ENST00000444712 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
SNX13-204ENST00000444712 B4E1Z4 1266 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 FIBPO43427 364 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 BBOX1O75936 387 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 CTDNEP1O95476 244 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 SART3Q15020 963 aaKnown RBP18.39■□□□□ 0.53
SNX13-204ENST00000444712 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 RIOK1Q9BRS2 568 aaKnown RBP18.39■□□□□ 0.53
SNX13-204ENST00000444712 BRIP1Q9BX63 1249 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 GDPD2Q9HCC8 539 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 TFCP2L1Q9NZI6 479 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 ANAPC4Q9UJX5 808 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 POLRMTO00411 1230 aaKnown RBP18.39■□□□□ 0.53
SNX13-204ENST00000444712 CPLX1O14810 134 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 CDKL5O76039 1030 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 PCP11498 1178 aaKnown RBP18.39■□□□□ 0.53
SNX13-204ENST00000444712 ATP2B4P23634 1241 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 KLRK1P26718 216 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 HOXA10P31260 410 aaPredicted RBP18.39■□□□□ 0.53
SNX13-204ENST00000444712 LIFRP42702 1097 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 CPLX2Q6PUV4 134 aaKnown RBP18.39■□□□□ 0.53
SNX13-204ENST00000444712 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 WDR66Q8TBY9 1149 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 CRAMP1Q96RY5 1269 aa18.39■□□□□ 0.53
SNX13-204ENST00000444712 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
SNX13-204ENST00000444712 NEDD4P46934 1319 aa18.38■□□□□ 0.53
SNX13-204ENST00000444712 WTIPA6NIX2 430 aaPredicted RBP18.38■□□□□ 0.53
SNX13-204ENST00000444712 CYB5R4Q7L1T6 521 aa18.38■□□□□ 0.53
SNX13-204ENST00000444712 SGMS1Q86VZ5 419 aa18.38■□□□□ 0.53
SNX13-204ENST00000444712 PROM2Q8N271 834 aa18.38■□□□□ 0.53
SNX13-204ENST00000444712 NSUN4Q96CB9 384 aaKnown RBP18.38■□□□□ 0.53
SNX13-204ENST00000444712 TMEM63CQ9P1W3 806 aa18.38■□□□□ 0.53
SNX13-204ENST00000444712 PRKAB2O43741 272 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 LETM1O95202 739 aaPredicted RBP18.37■□□□□ 0.53
SNX13-204ENST00000444712 XRCC6P12956 609 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX13-204ENST00000444712 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 ADGRA1Q86SQ6 560 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
SNX13-204ENST00000444712 BRPF3Q9ULD4 1205 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 ANKRD31Q8N7Z5 1873 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 BAZ2AQ9UIF9 1905 aaKnown RBP18.37■□□□□ 0.53
SNX13-204ENST00000444712 KLRG2A4D1S0 409 aaPredicted RBP18.37■□□□□ 0.53
SNX13-204ENST00000444712 PPARAQ07869 468 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 RESTQ13127 1097 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 FERMT3Q86UX7 667 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 TMTC2Q8N394 836 aa18.37■□□□□ 0.53
SNX13-204ENST00000444712 ERICH2A1L162 156 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 GADD45BO75293 160 aaPredicted RBP18.36■□□□□ 0.53
SNX13-204ENST00000444712 APBA3O96018 575 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 RXRBP28702 533 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 MECOMQ03112 1051 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 CTDSPL2Q05D32 466 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 DDR1Q08345 913 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 CHAF1AQ13111 956 aaPredicted RBP18.36■□□□□ 0.53
SNX13-204ENST00000444712 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 CRNKL1Q9BZJ0 848 aaKnown RBP18.36■□□□□ 0.53
SNX13-204ENST00000444712 CFAP45Q9UL16 551 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
SNX13-204ENST00000444712 METAP2P50579 478 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX13-204ENST00000444712 GSTO1P78417 241 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 LRSAM1Q6UWE0 723 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 TDRD7Q8NHU6 1098 aaKnown RBP18.35■□□□□ 0.53
SNX13-204ENST00000444712 IGDCC4Q8TDY8 1250 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 GPHNQ9NQX3 736 aaPredicted RBP18.35■□□□□ 0.53
SNX13-204ENST00000444712 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
SNX13-204ENST00000444712 GGA1Q9UJY5 639 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
SNX13-204ENST00000444712 NID2Q14112 1375 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 DTNBO60941 627 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 KDM4AO75164 1064 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 CCDC183Q5T5S1 534 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 APOA5Q6Q788 366 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 NFXL1Q6ZNB6 911 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 GAS2L3Q86XJ1 694 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 DZIP1Q86YF9 867 aaKnown RBP18.35■□□□□ 0.53
SNX13-204ENST00000444712 PODXL2Q9NZ53 605 aa18.35■□□□□ 0.53
SNX13-204ENST00000444712 CCDC69A6NI79 296 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 IFIT3O14879 490 aaKnown RBP18.34■□□□□ 0.53
SNX13-204ENST00000444712 ZBTB43O43298 467 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 NT5C2P49902 561 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 RCAN1P53805 252 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 CERS3Q8IU89 383 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 LY9Q9HBG7 655 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 LTBP1Q14766 1721 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 DLEC1Q9Y238 1755 aa18.34■□□□□ 0.53
SNX13-204ENST00000444712 SDR42E1Q8WUS8 393 aa18.33■□□□□ 0.53
SNX13-204ENST00000444712 ESR2Q92731 530 aa18.33■□□□□ 0.53
SNX13-204ENST00000444712 SPATA32Q96LK8 384 aa18.33■□□□□ 0.53
SNX13-204ENST00000444712 TOMM22Q9NS69 142 aa18.33■□□□□ 0.53
SNX13-204ENST00000444712 ECM29Q5VYK3 1845 aa18.33■□□□□ 0.52
SNX13-204ENST00000444712 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
SNX13-204ENST00000444712 GPSM2P81274 684 aa18.33■□□□□ 0.52
SNX13-204ENST00000444712 TXNRD3Q86VQ6 643 aa18.33■□□□□ 0.52
SNX13-204ENST00000444712 ZNF396Q96N95 335 aaPredicted RBP18.33■□□□□ 0.52
SNX13-204ENST00000444712 ORC3Q9UBD5 711 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms