RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PDE1AP54750 535 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 SLC8A3P57103 927 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 GNPTABQ3T906 1256 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 EP400NLQ6ZTU2 488 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 VSIG1Q86XK7 387 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC197Q8NCU1 140 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC51Q96ER9 411 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 PLCB1Q9NQ66 1216 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 DAAM1Q9Y4D1 1078 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 RALGAPBQ86X10 1494 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 GSTTP1A0A1W2PQM5 241 aa5.77□□□□□ -1.48
SCN11A-202ENST00000444237 SKIP12755 728 aa5.77□□□□□ -1.48
SCN11A-202ENST00000444237 ST5P78524 1137 aa5.77□□□□□ -1.48
SCN11A-202ENST00000444237 NAA30Q147X3 362 aaPredicted RBP5.77□□□□□ -1.48
SCN11A-202ENST00000444237 AMOTQ4VCS5 1084 aa5.77□□□□□ -1.48
SCN11A-202ENST00000444237 TDRD12Q587J7 1177 aaKnown RBP5.77□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC77Q9BR77 488 aa5.77□□□□□ -1.48
SCN11A-202ENST00000444237 UBAC1Q9BSL1 405 aa5.77□□□□□ -1.48
SCN11A-202ENST00000444237 A0A1W2PRG0 241 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ENO4A6NNW6 628 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 CASQ2O14958 399 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 SCP2P22307 547 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 NOP2P46087 812 aaKnown RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 DNA2P51530 1060 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ACTN3Q08043 901 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 PKP1Q13835 747 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 IDI1Q13907 227 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 UBLCP1Q8WVY7 318 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 LARP6Q9BRS8 491 aaKnown RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 CENPKQ9BS16 269 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 SLC4A2P04920 1241 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 RFC1P35251 1148 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ATP1A2P50993 1020 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 NLRP12P59046 1061 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 LAMB3Q13751 1172 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 HIBCHQ6NVY1 386 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 TAOK1Q7L7X3 1001 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 TMEM87AQ8NBN3 555 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 RAB3IL1Q8TBN0 382 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 LEO1Q8WVC0 666 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 CDK5RAP3Q96JB5 506 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ZCCHC17Q9NP64 241 aaKnown RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 HOMER3Q9NSC5 361 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 MYO1AQ9UBC5 1043 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 STK38LQ9Y2H1 464 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 U3KPZ7 1027 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 PIK3C2GO75747 1445 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 STX10O60499 249 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 COG7P83436 770 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 KIAA0753Q2KHM9 967 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 FBXW10Q5XX13 1052 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 NECAB1Q8N987 351 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 KLHDC4Q8TBB5 520 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 SYTL4Q96C24 671 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 DCTPP1Q9H773 170 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 IL1RAPL2Q9NP60 686 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 CTTNBP2NLQ9P2B4 639 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 SAR1BQ9Y6B6 198 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 TRIM21P19474 475 aaKnown RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ZBTB16Q05516 673 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 PDE1CQ14123 709 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 SARM1Q6SZW1 724 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ANKRD44Q8N8A2 993 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ANKRD24Q8TF21 1146 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 USP6NLQ92738 828 aa5.77□□□□□ -1.49
SCN11A-202ENST00000444237 ZNF330Q9Y3S2 320 aaPredicted RBP5.77□□□□□ -1.49
SCN11A-202ENST00000444237 PLEKHG2Q9H7P9 1386 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 FCHSD2O94868 740 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 CHRM1P11229 460 aaPredicted RBP5.76□□□□□ -1.49
SCN11A-202ENST00000444237 TMED1Q13445 227 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 INF2Q27J81 1249 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 WASHC4Q2M389 1173 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 ALS2CLQ60I27 953 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 TEX9Q8N6V9 391 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 SMC1BQ8NDV3 1235 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 BRF1Q92994 677 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 GFM2Q969S9 779 aaKnown RBP5.76□□□□□ -1.49
SCN11A-202ENST00000444237 HOOK2Q96ED9 719 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 ABCB6Q9NP58 842 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 NKIRAS1Q9NYS0 192 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 ZRANB1Q9UGI0 708 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 SPTLC2O15270 562 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 MEFVO15553 781 aaPredicted RBP5.76□□□□□ -1.49
SCN11A-202ENST00000444237 NBPF14Q5TI25 921 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 IGSF22Q8N9C0 903 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 MCUR1Q96AQ8 359 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 RMND1Q9NWS8 449 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 MTRF1LQ9UGC7 380 aaKnown RBP5.76□□□□□ -1.49
SCN11A-202ENST00000444237 TSKSQ9UJT2 592 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 CAND2O75155 1236 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 IRX4P78413 519 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 MYO1EQ12965 1108 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 PLCB4Q15147 1175 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 PAF1Q8N7H5 531 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 CCDC110Q8TBZ0 833 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 ARHGEF2Q92974 986 aaKnown RBP5.76□□□□□ -1.49
SCN11A-202ENST00000444237 MAGI3Q5TCQ9 1506 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 HMOX1P09601 288 aa5.76□□□□□ -1.49
SCN11A-202ENST00000444237 GUCY1B3Q02153 619 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms