RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 CUL4AQ13619 759 aa22.64■■□□□ 1.21
SNX17-203ENST00000440760 CCDC93Q567U6 631 aa22.64■■□□□ 1.21
SNX17-203ENST00000440760 Q6ZUG5 572 aa22.64■■□□□ 1.21
SNX17-203ENST00000440760 TBC1D22AQ8WUA7 517 aa22.64■■□□□ 1.21
SNX17-203ENST00000440760 INCENPQ9NQS7 918 aa22.64■■□□□ 1.21
SNX17-203ENST00000440760 MROH7-TTC4A0A0A0MT08 1334 aa22.64■■□□□ 1.21
SNX17-203ENST00000440760 CDK5RAP2Q96SN8 1893 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 F8W031 263 aaPredicted RBP22.63■■□□□ 1.21
SNX17-203ENST00000440760 SMIM22K7EJ46 135 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 ECE2O60344 883 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 CC2D2BQ6DHV5 1058 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 STK11IPQ8N1F8 1099 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 TACC3Q9Y6A5 838 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 NEDD4P46934 1319 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 LAMB1P07942 1786 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 PTGER2P43116 358 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 DHX32Q7L7V1 743 aaKnown RBP22.63■■□□□ 1.21
SNX17-203ENST00000440760 IL27Q8NEV9 243 aa22.63■■□□□ 1.21
SNX17-203ENST00000440760 DTNBO60941 627 aa22.62■■□□□ 1.21
SNX17-203ENST00000440760 TGFB2P61812 414 aa22.62■■□□□ 1.21
SNX17-203ENST00000440760 GSTO1P78417 241 aa22.62■■□□□ 1.21
SNX17-203ENST00000440760 ME3Q16798 604 aa22.62■■□□□ 1.21
SNX17-203ENST00000440760 CYP2D7A0A087X1C5 515 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 PPIP5K2O43314 1243 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 HMGB1P09429 215 aaKnown RBP22.61■■□□□ 1.21
SNX17-203ENST00000440760 EXOSC10Q01780 885 aaKnown RBP22.61■■□□□ 1.21
SNX17-203ENST00000440760 KIAA2012Q0VF49 1180 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 ST3GAL1Q11201 340 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 MB21D2Q8IYB1 491 aaPredicted RBP22.61■■□□□ 1.21
SNX17-203ENST00000440760 SH3RF3Q8TEJ3 882 aaPredicted RBP22.61■■□□□ 1.21
SNX17-203ENST00000440760 CRNKL1Q9BZJ0 848 aaKnown RBP22.61■■□□□ 1.21
SNX17-203ENST00000440760 CHMP5Q9NZZ3 219 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 PIM2Q9P1W9 311 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 NAV1Q8NEY1 1877 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 COL4A5P29400 1685 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 EVX2Q03828 476 aa22.61■■□□□ 1.21
SNX17-203ENST00000440760 RALYLQ86SE5 291 aaKnown RBP22.61■■□□□ 1.21
SNX17-203ENST00000440760 MINDY4BA8MYZ0 360 aa22.6■■□□□ 1.21
SNX17-203ENST00000440760 PODNQ7Z5L7 613 aa22.6■■□□□ 1.21
SNX17-203ENST00000440760 CCDC83Q8IWF9 413 aa22.6■■□□□ 1.21
SNX17-203ENST00000440760 NECAB1Q8N987 351 aa22.6■■□□□ 1.21
SNX17-203ENST00000440760 NCOA7Q8NI08 942 aa22.6■■□□□ 1.21
SNX17-203ENST00000440760 BRF1Q92994 677 aa22.6■■□□□ 1.21
SNX17-203ENST00000440760 ALDH8A1Q9H2A2 487 aaPredicted RBP22.6■■□□□ 1.21
SNX17-203ENST00000440760 GPHNQ9NQX3 736 aaPredicted RBP22.6■■□□□ 1.21
SNX17-203ENST00000440760 BTDP43251 543 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 ANTXR2P58335 489 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 FGD1P98174 961 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 PPARAQ07869 468 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 ANKRD1Q15327 319 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 TMED8Q6PL24 325 aaPredicted RBP22.59■■□□□ 1.21
SNX17-203ENST00000440760 B4E1Z4 1266 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 SLC4A8Q2Y0W8 1093 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 SUPT20HQ8NEM7 779 aa22.59■■□□□ 1.21
SNX17-203ENST00000440760 DCP1AQ9NPI6 582 aaPredicted RBP22.59■■□□□ 1.21
SNX17-203ENST00000440760 ZNF277Q9NRM2 450 aaPredicted RBP22.59■■□□□ 1.21
SNX17-203ENST00000440760 PRC1O43663 620 aa22.58■■□□□ 1.21
SNX17-203ENST00000440760 STK3Q13188 491 aa22.58■■□□□ 1.21
SNX17-203ENST00000440760 RTKN2Q8IZC4 609 aa22.58■■□□□ 1.21
SNX17-203ENST00000440760 LDHCP07864 332 aa22.58■■□□□ 1.2
SNX17-203ENST00000440760 CYB5R4Q7L1T6 521 aa22.58■■□□□ 1.2
SNX17-203ENST00000440760 NOL10Q9BSC4 688 aaKnown RBP22.58■■□□□ 1.2
SNX17-203ENST00000440760 TTF2Q9UNY4 1162 aaKnown RBP22.58■■□□□ 1.2
SNX17-203ENST00000440760 IGSF3O75054 1194 aa22.57■■□□□ 1.2
SNX17-203ENST00000440760 SCNN1DP51172 638 aa22.57■■□□□ 1.2
SNX17-203ENST00000440760 APOBRQ0VD83 1088 aa22.57■■□□□ 1.2
SNX17-203ENST00000440760 TRDNQ13061 729 aa22.57■■□□□ 1.2
SNX17-203ENST00000440760 DALRD3Q5D0E6 543 aaKnown RBP22.57■■□□□ 1.2
SNX17-203ENST00000440760 ZSCAN31Q96LW9 406 aaPredicted RBP22.57■■□□□ 1.2
SNX17-203ENST00000440760 PSMD1Q99460 953 aa22.57■■□□□ 1.2
SNX17-203ENST00000440760 DAGLAQ9Y4D2 1042 aa22.57■■□□□ 1.2
SNX17-203ENST00000440760 GAKO14976 1311 aa22.57■■□□□ 1.2
SNX17-203ENST00000440760 PSME4Q14997 1843 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 YDJCA8MPS7 323 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 USP17L12C9JPN9 530 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 USP17L21D6R901 530 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 BAG3O95817 575 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 CYP2D6P10635 497 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 MCM5P33992 734 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 PKP1Q13835 747 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 AKNAD1Q5T1N1 836 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 CTR9Q6PD62 1173 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 INTS4Q96HW7 963 aaKnown RBP22.56■■□□□ 1.2
SNX17-203ENST00000440760 SH2B1Q9NRF2 756 aaPredicted RBP22.56■■□□□ 1.2
SNX17-203ENST00000440760 GPR75-ASB3A0A0A6YYF3 556 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 RRP12Q5JTH9 1297 aaKnown RBP22.56■■□□□ 1.2
SNX17-203ENST00000440760 DACT2Q5SW24 774 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 STAG1Q8WVM7 1258 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 TOMM22Q9NS69 142 aa22.56■■□□□ 1.2
SNX17-203ENST00000440760 DDX60LQ5H9U9 1706 aaKnown RBP22.56■■□□□ 1.2
SNX17-203ENST00000440760 UTRNP46939 3433 aa22.55■■□□□ 1.2
SNX17-203ENST00000440760 USP5P45974 858 aa22.55■■□□□ 1.2
SNX17-203ENST00000440760 PPP4CP60510 307 aa22.55■■□□□ 1.2
SNX17-203ENST00000440760 NLGN2Q8NFZ4 835 aa22.55■■□□□ 1.2
SNX17-203ENST00000440760 AGXT2Q9BYV1 514 aa22.55■■□□□ 1.2
SNX17-203ENST00000440760 ATP8A2Q9NTI2 1148 aa22.55■■□□□ 1.2
SNX17-203ENST00000440760 CIZ1Q9ULV3 898 aaPredicted RBP22.55■■□□□ 1.2
SNX17-203ENST00000440760 FOCADQ5VW36 1801 aa22.55■■□□□ 1.2
SNX17-203ENST00000440760 NBR1Q14596 966 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms