RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 PCMTD2Q9NV79 361 aa6□□□□□ -1.45
VPS41-207ENST00000439468 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 HYAL3O43820 417 aaPredicted RBP5.99□□□□□ -1.45
VPS41-207ENST00000439468 XRCC5P13010 732 aaKnown RBP5.99□□□□□ -1.45
VPS41-207ENST00000439468 FMR1Q06787 632 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS41-207ENST00000439468 ALG1LQ6GMV1 187 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 CDPF1Q6NVV7 123 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 SHKBP1Q8TBC3 707 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 FBF1Q8TES7 1133 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 GIPC2Q8TF65 315 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 BCL2L13Q9BXK5 485 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 TMEM39AQ9NV64 488 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 WWC3Q9ULE0 1092 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 ACTL7BQ9Y614 415 aa5.99□□□□□ -1.45
VPS41-207ENST00000439468 WDR64B1ANS9 1081 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 AOC2O75106 756 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 P4HBP07237 508 aaKnown RBP5.98□□□□□ -1.45
VPS41-207ENST00000439468 ZNF16P17020 682 aaPredicted RBP5.98□□□□□ -1.45
VPS41-207ENST00000439468 LIG1P18858 919 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 GSTT1P30711 240 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 GRIK1P39086 918 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 ASPAP45381 313 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 FBXO33Q7Z6M2 555 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 SULF2Q8IWU5 870 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 KCNB2Q92953 911 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 CBX8Q9HC52 389 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 ATG3Q9NT62 314 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 SPG7Q9UQ90 795 aa5.98□□□□□ -1.45
VPS41-207ENST00000439468 RBM47A0AV96 593 aaKnown RBP5.97□□□□□ -1.45
VPS41-207ENST00000439468 COBLO75128 1261 aa5.97□□□□□ -1.45
VPS41-207ENST00000439468 FBXO24O75426 580 aa5.97□□□□□ -1.45
VPS41-207ENST00000439468 LDHBP07195 334 aaKnown RBP5.97□□□□□ -1.45
VPS41-207ENST00000439468 GSTP1P09211 210 aaKnown RBP5.97□□□□□ -1.45
VPS41-207ENST00000439468 TPTE2Q6XPS3 522 aa5.97□□□□□ -1.45
VPS41-207ENST00000439468 ZDHHC13Q8IUH4 622 aa5.97□□□□□ -1.45
VPS41-207ENST00000439468 WDR18Q9BV38 432 aa5.97□□□□□ -1.45
VPS41-207ENST00000439468 OSBPL1AQ9BXW6 950 aa5.97□□□□□ -1.45
VPS41-207ENST00000439468 CCDC86Q9H6F5 360 aaKnown RBP5.97□□□□□ -1.45
VPS41-207ENST00000439468 LGR6Q9HBX8 967 aa5.97□□□□□ -1.45
VPS41-207ENST00000439468 NFICP08651 508 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 ERCC3P19447 782 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 MAP7Q14244 749 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 EAPPQ56P03 285 aaPredicted RBP5.96□□□□□ -1.46
VPS41-207ENST00000439468 ACSBG1Q96GR2 724 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 TBC1D32Q96NH3 1257 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 PIDD1Q9HB75 910 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 FAM105AQ9NUU6 356 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
VPS41-207ENST00000439468 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.95□□□□□ -1.46
VPS41-207ENST00000439468 SLFN14P0C7P3 912 aa5.95□□□□□ -1.46
VPS41-207ENST00000439468 MAP1SQ66K74 1059 aaPredicted RBP5.95□□□□□ -1.46
VPS41-207ENST00000439468 SRCIN1Q9C0H9 1055 aa5.95□□□□□ -1.46
VPS41-207ENST00000439468 PPP1R9AQ9ULJ8 1098 aa5.95□□□□□ -1.46
VPS41-207ENST00000439468 LEMD3Q9Y2U8 911 aa5.95□□□□□ -1.46
VPS41-207ENST00000439468 GIPC1O14908 333 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 RNGTTO60942 597 aaKnown RBP5.94□□□□□ -1.46
VPS41-207ENST00000439468 NME2P22392 152 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 CD97P48960 835 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 ID3Q02535 119 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 WDR89Q96FK6 387 aaPredicted RBP5.94□□□□□ -1.46
VPS41-207ENST00000439468 FAM161BQ96MY7 647 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 PSMG3-AS1Q96PY0 264 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 EMILIN2Q9BXX0 1053 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 OSBPL7Q9BZF2 842 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 CEP44Q9C0F1 390 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 C12orf49Q9H741 205 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 KIAA1522Q9P206 1035 aaPredicted RBP5.94□□□□□ -1.46
VPS41-207ENST00000439468 SAMM50Q9Y512 469 aa5.94□□□□□ -1.46
VPS41-207ENST00000439468 PRR19A6NJB7 356 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 TMPRSS2O15393 492 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 ZNF862O60290 1169 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 F13BP05160 661 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 USP17L7P0C7H9 530 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 ARNTP27540 789 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 INTS5Q6P9B9 1019 aaKnown RBP5.93□□□□□ -1.46
VPS41-207ENST00000439468 C3orf58Q8NDZ4 430 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 STK35Q8TDR2 534 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 EZH1Q92800 747 aaPredicted RBP5.93□□□□□ -1.46
VPS41-207ENST00000439468 MRRFQ96E11 262 aaKnown RBP5.93□□□□□ -1.46
VPS41-207ENST00000439468 ATXN3LQ9H3M9 355 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 SEMA6CQ9H3T2 930 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 SSU72Q9NP77 194 aaKnown RBP5.93□□□□□ -1.46
VPS41-207ENST00000439468 KRT82Q9NSB4 513 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 PIM2Q9P1W9 311 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 FAM8A1Q9UBU6 413 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 PRKAG2Q9UGJ0 569 aa5.93□□□□□ -1.46
VPS41-207ENST00000439468 TTF2Q9UNY4 1162 aaKnown RBP5.93□□□□□ -1.46
VPS41-207ENST00000439468 EIF4BP23588 611 aaKnown RBP5.92□□□□□ -1.46
VPS41-207ENST00000439468 ADMP35318 185 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 ZAR1Q86SH2 424 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 PDZD3Q86UT5 571 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 SHISA5Q8N114 240 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 NECAB3Q96P71 396 aaPredicted RBP5.92□□□□□ -1.46
VPS41-207ENST00000439468 METTL22Q9BUU2 404 aaPredicted RBP5.92□□□□□ -1.46
VPS41-207ENST00000439468 ACSS3Q9H6R3 686 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 LRRC4CQ9HCJ2 640 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 PICK1Q9NRD5 415 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 CRIM1Q9NZV1 1036 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 PPM1HQ9ULR3 514 aa5.92□□□□□ -1.46
VPS41-207ENST00000439468 FAM170BA6NMN3 283 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 611.5 ms