RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.89
HCG20-208ENST00000439406 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
HCG20-208ENST00000439406 ZNF541Q9H0D2 1346 aa9.52□□□□□ -0.89
HCG20-208ENST00000439406 ZBTB7BO15156 539 aaPredicted RBP9.51□□□□□ -0.89
HCG20-208ENST00000439406 EIF6P56537 245 aaKnown RBP9.51□□□□□ -0.89
HCG20-208ENST00000439406 LYPD8Q6UX82 237 aa9.51□□□□□ -0.89
HCG20-208ENST00000439406 TPTE2Q6XPS3 522 aa9.51□□□□□ -0.89
HCG20-208ENST00000439406 SAPCD2Q86UD0 394 aa9.51□□□□□ -0.89
HCG20-208ENST00000439406 RETREG3Q86VR2 466 aa9.51□□□□□ -0.89
HCG20-208ENST00000439406 MRFAP1L1Q96HT8 127 aa9.51□□□□□ -0.89
HCG20-208ENST00000439406 HINFPQ9BQA5 517 aa9.51□□□□□ -0.89
HCG20-208ENST00000439406 CHPF2Q9P2E5 772 aa9.51□□□□□ -0.89
HCG20-208ENST00000439406 TNRC18O15417 2968 aaPredicted RBP9.51□□□□□ -0.89
HCG20-208ENST00000439406 PEX14O75381 377 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 SLC10A3P09131 477 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 COL9A1P20849 921 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 IL13P35225 146 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 ATP2B2Q01814 1243 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 GRM1Q13255 1194 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 CCDC102BQ68D86 513 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 TRAF7Q6Q0C0 670 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 NBPF5PQ86XG9 351 aaPredicted RBP9.5□□□□□ -0.89
HCG20-208ENST00000439406 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
HCG20-208ENST00000439406 CASP8AP2Q9UKL3 1982 aa9.5□□□□□ -0.89
HCG20-208ENST00000439406 THSD7BQ9C0I4 1608 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 AOC2O75106 756 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 CAMTA2O94983 1202 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 GTF2IP78347 998 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 FILIP1Q7Z7B0 1213 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 CITED4Q96RK1 184 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 FAN1Q9Y2M0 1017 aa9.49□□□□□ -0.89
HCG20-208ENST00000439406 ARFGEF2Q9Y6D5 1785 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 CCDC194A0A1B0GVG4 234 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 EPS15P42566 896 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 FUT2Q10981 343 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 NOGQ13253 232 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 GLIPR1L2Q4G1C9 344 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 ZNF790Q6PG37 636 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 PCDH12Q9NPG4 1184 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 IFT57Q9NWB7 429 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 PGAP2Q9UHJ9 254 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 ZNF652Q9Y2D9 606 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
HCG20-208ENST00000439406 TRPM7Q96QT4 1865 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 SCNN1DP51172 638 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 EHHADHQ08426 723 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 DSC3Q14574 896 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 MORC1Q86VD1 984 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
HCG20-208ENST00000439406 TPCN2Q8NHX9 752 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 GCC1Q96CN9 775 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 ZNF496Q96IT1 587 aaPredicted RBP9.47□□□□□ -0.89
HCG20-208ENST00000439406 PRKD2Q9BZL6 878 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 ADARB2Q9NS39 739 aaKnown RBP9.47□□□□□ -0.89
HCG20-208ENST00000439406 COL11A2P13942 1736 aaPredicted RBP9.47□□□□□ -0.89
HCG20-208ENST00000439406 HEG1Q9ULI3 1381 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 MRC1P22897 1456 aa9.47□□□□□ -0.89
HCG20-208ENST00000439406 SMAPO00193 183 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 TRAF5O00463 557 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 CELF2O95319 508 aaKnown RBP9.46□□□□□ -0.9
HCG20-208ENST00000439406 A1BGP04217 495 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 XRCC5P13010 732 aaKnown RBP9.46□□□□□ -0.9
HCG20-208ENST00000439406 NPR3P17342 541 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 PTK2Q05397 1052 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 MTHFSDQ2M296 383 aaKnown RBP9.46□□□□□ -0.9
HCG20-208ENST00000439406 CIAPIN1Q6FI81 312 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 SMC5Q8IY18 1101 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 DMRTB1Q96MA1 342 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 FMNL2Q96PY5 1086 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 RNF19AQ9NV58 838 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 SAGE1Q9NXZ1 904 aa9.46□□□□□ -0.9
HCG20-208ENST00000439406 DNAJC6O75061 913 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 LGR5O75473 907 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 WEE1P30291 646 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 TEFQ10587 303 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 FKBP5Q13451 457 aaPredicted RBP9.45□□□□□ -0.9
HCG20-208ENST00000439406 PLEKHG6Q3KR16 790 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 CAPN12Q6ZSI9 719 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 COL26A1Q96A83 441 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 GPRC5DQ9NZD1 345 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 CACNA1SQ13698 1873 aa9.45□□□□□ -0.9
HCG20-208ENST00000439406 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
HCG20-208ENST00000439406 GTF2E1P29083 439 aaPredicted RBP9.44□□□□□ -0.9
HCG20-208ENST00000439406 NAA30Q147X3 362 aaPredicted RBP9.44□□□□□ -0.9
HCG20-208ENST00000439406 OLFM4Q6UX06 510 aa9.44□□□□□ -0.9
HCG20-208ENST00000439406 MCF2L2Q86YR7 1114 aa9.44□□□□□ -0.9
HCG20-208ENST00000439406 CCAR1Q8IX12 1150 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms