RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
TVP23C-204ENST00000438826 SH2B2O14492 632 aaPredicted RBP20.41■□□□□ 0.86
TVP23C-204ENST00000438826 TMED8Q6PL24 325 aaPredicted RBP20.41■□□□□ 0.86
TVP23C-204ENST00000438826 MFSD6Q6ZSS7 791 aa20.41■□□□□ 0.86
TVP23C-204ENST00000438826 STAG1Q8WVM7 1258 aa20.41■□□□□ 0.86
TVP23C-204ENST00000438826 NSUN4Q96CB9 384 aaKnown RBP20.41■□□□□ 0.86
TVP23C-204ENST00000438826 APBA3O96018 575 aa20.41■□□□□ 0.86
TVP23C-204ENST00000438826 CHAF1AQ13111 956 aaPredicted RBP20.41■□□□□ 0.86
TVP23C-204ENST00000438826 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
TVP23C-204ENST00000438826 ZNF384Q8TF68 577 aa20.41■□□□□ 0.86
TVP23C-204ENST00000438826 ZSCAN16Q9H4T2 348 aaPredicted RBP20.41■□□□□ 0.86
TVP23C-204ENST00000438826 MECOMQ03112 1051 aa20.4■□□□□ 0.86
TVP23C-204ENST00000438826 SDR42E1Q8WUS8 393 aa20.4■□□□□ 0.86
TVP23C-204ENST00000438826 INCENPQ9NQS7 918 aa20.4■□□□□ 0.86
TVP23C-204ENST00000438826 BBOX1O75936 387 aa20.39■□□□□ 0.86
TVP23C-204ENST00000438826 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.86
TVP23C-204ENST00000438826 C15orf52Q6ZUT6 534 aaKnown RBP20.39■□□□□ 0.86
TVP23C-204ENST00000438826 IGDCC4Q8TDY8 1250 aa20.39■□□□□ 0.86
TVP23C-204ENST00000438826 RNF41Q9H4P4 317 aaPredicted RBP20.39■□□□□ 0.86
TVP23C-204ENST00000438826 ZSWIM5Q9P217 1185 aa20.39■□□□□ 0.86
TVP23C-204ENST00000438826 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.85
TVP23C-204ENST00000438826 KDM4AO75164 1064 aa20.39■□□□□ 0.85
TVP23C-204ENST00000438826 RESTQ13127 1097 aa20.39■□□□□ 0.85
TVP23C-204ENST00000438826 SPTY2D1Q68D10 685 aaPredicted RBP20.39■□□□□ 0.85
TVP23C-204ENST00000438826 AKT1S1Q96B36 256 aa20.39■□□□□ 0.85
TVP23C-204ENST00000438826 MYH13Q9UKX3 1938 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 KLRG2A4D1S0 409 aaPredicted RBP20.38■□□□□ 0.85
TVP23C-204ENST00000438826 CPLX1O14810 134 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 IGSF3O75054 1194 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 RXRBP28702 533 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 DYNLL1P63167 89 aaKnown RBP20.38■□□□□ 0.85
TVP23C-204ENST00000438826 PPARAQ07869 468 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 TMEM67Q5HYA8 995 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 FAM173BQ6P4H8 233 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 ZNF804AQ7Z570 1209 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 BRIP1Q9BX63 1249 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 SCAND2PQ9GZW5 306 aaPredicted RBP20.38■□□□□ 0.85
TVP23C-204ENST00000438826 ANAPC4Q9UJX5 808 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 TACC3Q9Y6A5 838 aa20.38■□□□□ 0.85
TVP23C-204ENST00000438826 LIFRP42702 1097 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 GPSM2P81274 684 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 GIMAP6Q6P9H5 292 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 SGMS1Q86VZ5 419 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 LY9Q9HBG7 655 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 ELP1O95163 1332 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 FDPSP14324 419 aaKnown RBP20.37■□□□□ 0.85
TVP23C-204ENST00000438826 PRDX5P30044 214 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 TDRD7Q8NHU6 1098 aaKnown RBP20.37■□□□□ 0.85
TVP23C-204ENST00000438826 WDR66Q8TBY9 1149 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 CRAMP1Q96RY5 1269 aa20.37■□□□□ 0.85
TVP23C-204ENST00000438826 SYCE3A1L190 88 aa20.36■□□□□ 0.85
TVP23C-204ENST00000438826 MINDY4BA8MYZ0 360 aa20.36■□□□□ 0.85
TVP23C-204ENST00000438826 IFIT3O14879 490 aaKnown RBP20.36■□□□□ 0.85
TVP23C-204ENST00000438826 ATP2B4P23634 1241 aa20.36■□□□□ 0.85
TVP23C-204ENST00000438826 METAP2P50579 478 aaKnown RBP eCLIP20.36■□□□□ 0.85
TVP23C-204ENST00000438826 APOA5Q6Q788 366 aa20.36■□□□□ 0.85
TVP23C-204ENST00000438826 NFXL1Q6ZNB6 911 aa20.36■□□□□ 0.85
TVP23C-204ENST00000438826 MTA3Q9BTC8 594 aa20.36■□□□□ 0.85
TVP23C-204ENST00000438826 CHD4Q14839 1912 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 SART3Q15020 963 aaKnown RBP20.35■□□□□ 0.85
TVP23C-204ENST00000438826 RRP12Q5JTH9 1297 aaKnown RBP20.35■□□□□ 0.85
TVP23C-204ENST00000438826 COL23A1Q86Y22 540 aaPredicted RBP20.35■□□□□ 0.85
TVP23C-204ENST00000438826 RAB11FIP4Q86YS3 637 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 FLAD1Q8NFF5 587 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 TOMM22Q9NS69 142 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 GGA1Q9UJY5 639 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 UFL1O94874 794 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 LRSAM1Q6UWE0 723 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 TTC6Q86TZ1 520 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 DZIP1Q86YF9 867 aaKnown RBP20.35■□□□□ 0.85
TVP23C-204ENST00000438826 JAG2Q9Y219 1238 aa20.35■□□□□ 0.85
TVP23C-204ENST00000438826 ZBTB43O43298 467 aa20.34■□□□□ 0.85
TVP23C-204ENST00000438826 CDKL5O76039 1030 aa20.34■□□□□ 0.85
TVP23C-204ENST00000438826 FOSBP53539 338 aa20.34■□□□□ 0.85
TVP23C-204ENST00000438826 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
TVP23C-204ENST00000438826 SPATA32Q96LK8 384 aa20.34■□□□□ 0.85
TVP23C-204ENST00000438826 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
TVP23C-204ENST00000438826 CRNKL1Q9BZJ0 848 aaKnown RBP20.34■□□□□ 0.85
TVP23C-204ENST00000438826 SENP2Q9HC62 589 aa20.34■□□□□ 0.85
TVP23C-204ENST00000438826 AATFQ9NY61 560 aaKnown RBP eCLIP20.34■□□□□ 0.85
TVP23C-204ENST00000438826 TFIP11Q9UBB9 837 aaKnown RBP20.34■□□□□ 0.85
TVP23C-204ENST00000438826 ORC3Q9UBD5 711 aaPredicted RBP20.34■□□□□ 0.85
TVP23C-204ENST00000438826 LDHBP07195 334 aaKnown RBP20.33■□□□□ 0.85
TVP23C-204ENST00000438826 CCDC183Q5T5S1 534 aa20.33■□□□□ 0.85
TVP23C-204ENST00000438826 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.85
TVP23C-204ENST00000438826 PODXL2Q9NZ53 605 aa20.33■□□□□ 0.85
TVP23C-204ENST00000438826 CFAP45Q9UL16 551 aa20.33■□□□□ 0.85
TVP23C-204ENST00000438826 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.85
TVP23C-204ENST00000438826 ERICH2A1L162 156 aa20.33■□□□□ 0.84
TVP23C-204ENST00000438826 CCDC69A6NI79 296 aa20.33■□□□□ 0.84
TVP23C-204ENST00000438826 MICU3Q86XE3 530 aa20.33■□□□□ 0.84
TVP23C-204ENST00000438826 STK11IPQ8N1F8 1099 aa20.33■□□□□ 0.84
TVP23C-204ENST00000438826 TMTC2Q8N394 836 aa20.33■□□□□ 0.84
TVP23C-204ENST00000438826 GPR101Q96P66 508 aaPredicted RBP20.33■□□□□ 0.84
TVP23C-204ENST00000438826 PCP11498 1178 aaKnown RBP20.32■□□□□ 0.84
TVP23C-204ENST00000438826 ADD1P35611 737 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms