RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PRPF40BQ6NWY9 871 aaKnown RBP5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 GSX1Q9H4S2 264 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 CCDC39Q9UFE4 941 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 ADGRE2Q9UHX3 823 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 PRNPP04156 253 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 CYP27A1Q02318 531 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 DUSP27Q5VZP5 1158 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 VSIG10LQ86VR7 867 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 ABI1Q8IZP0 508 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 RETREG2Q8NC44 543 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 ARID3AQ99856 593 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 WDR18Q9BV38 432 aa5.79□□□□□ -1.48
HMGB1P18-201ENST00000438801 ZNF157P51786 506 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 PDE4CQ08493 712 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 RPS26P11Q5JNZ5 115 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 SEZ6L2Q6UXD5 910 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 ZNF765Q7L2R6 523 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 CCER1Q8TC90 406 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 DMRTB1Q96MA1 342 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 CSRNP1Q96S65 589 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 BSDC1Q9NW68 430 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 TRAK1Q9UPV9 953 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 DAGLAQ9Y4D2 1042 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 RNF114Q9Y508 228 aa5.78□□□□□ -1.48
HMGB1P18-201ENST00000438801 SYNGAP1Q96PV0 1343 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 LIG1P18858 919 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 FAAP100Q0VG06 881 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 GRM2Q14416 872 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 NFXL1Q6ZNB6 911 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 TP53INP2Q8IXH6 220 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 GLIS3Q8NEA6 775 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 EPS8L3Q8TE67 593 aaKnown RBP5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 ALKBH8Q96BT7 664 aaKnown RBP5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 FBXL18Q96ME1 805 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 RBCK1Q9BYM8 510 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 C1GALT1Q9NS00 363 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 PPP1R9AQ9ULJ8 1098 aa5.77□□□□□ -1.49
HMGB1P18-201ENST00000438801 RB1CC1Q8TDY2 1594 aa5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 TMPRSS2O15393 492 aa5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 DYNC1LI2O43237 492 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 CYB5RLQ6IPT4 315 aa5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 WDR89Q96FK6 387 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 ZC3H12CQ9C0D7 883 aaKnown RBP5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 CCDC86Q9H6F5 360 aaKnown RBP5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 LGR6Q9HBX8 967 aa5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 LRRC4CQ9HCJ2 640 aa5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 ZC3H7BQ9UGR2 993 aaKnown RBP5.76□□□□□ -1.49
HMGB1P18-201ENST00000438801 ZNF862O60290 1169 aa5.75□□□□□ -1.49
HMGB1P18-201ENST00000438801 SLFN14P0C7P3 912 aa5.75□□□□□ -1.49
HMGB1P18-201ENST00000438801 OGFOD3Q6PK18 319 aa5.75□□□□□ -1.49
HMGB1P18-201ENST00000438801 DTHD1Q6ZMT9 781 aa5.75□□□□□ -1.49
HMGB1P18-201ENST00000438801 NLRP2Q9NX02 1062 aa5.75□□□□□ -1.49
HMGB1P18-201ENST00000438801 CRIM1Q9NZV1 1036 aa5.75□□□□□ -1.49
HMGB1P18-201ENST00000438801 SOWAHDA6NJG2 315 aa5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 GSTP1P09211 210 aaKnown RBP5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 FCGRTP55899 365 aa5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 FANCD2OSQ96PS1 177 aa5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 ATXN3LQ9H3M9 355 aa5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 PIDD1Q9HB75 910 aa5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 PPP4R2Q9NY27 417 aa5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 GPN3Q9UHW5 284 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P18-201ENST00000438801 SUPT5HO00267 1087 aaKnown RBP5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 HNRNPUQ00839 825 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 ID3Q02535 119 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 PPP2R3AQ06190 1150 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 KIF4BQ2VIQ3 1234 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 PI16Q6UXB8 463 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 CBLL1Q75N03 491 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 TMC7Q7Z402 723 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 AGBL5Q8NDL9 886 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 KRT82Q9NSB4 513 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 TMEM39AQ9NV64 488 aa5.73□□□□□ -1.49
HMGB1P18-201ENST00000438801 XRCC5P13010 732 aaKnown RBP5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 CDK5R2Q13319 367 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 COL19A1Q14993 1142 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 CYP27C1Q4G0S4 372 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 BCO2Q9BYV7 579 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 PAK6Q9NQU5 681 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 DISC1Q9NRI5 854 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 BIN2Q9UBW5 565 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 DCTN4Q9UJW0 460 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 SLC5A6Q9Y289 635 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 PCDHGC5Q9Y5F6 944 aa5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 BAZ1AQ9NRL2 1556 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P18-201ENST00000438801 SYNJ2O15056 1496 aa5.71□□□□□ -1.49
HMGB1P18-201ENST00000438801 YBX3P16989 372 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P18-201ENST00000438801 TTLL4Q14679 1199 aa5.71□□□□□ -1.5
HMGB1P18-201ENST00000438801 PDZD3Q86UT5 571 aa5.71□□□□□ -1.5
HMGB1P18-201ENST00000438801 SMYD4Q8IYR2 804 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P18-201ENST00000438801 BCL7CQ8WUZ0 217 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P18-201ENST00000438801 KCNB2Q92953 911 aa5.71□□□□□ -1.5
HMGB1P18-201ENST00000438801 ARHGEF11O15085 1522 aa5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 BTBD11A6QL63 1104 aa5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 RNGTTO60942 597 aaKnown RBP5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 FAM87AP0C7U9 286 aa5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 DSC3Q14574 896 aa5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms