RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 PCDHGC4Q9Y5F7 938 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 PCDHGA11Q9Y5H2 935 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 NPC1L1Q9UHC9 1359 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
LINC00271-203ENST00000438618 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
LINC00271-203ENST00000438618 MMP10P09238 476 aa9.58□□□□□ -0.88
LINC00271-203ENST00000438618 CRKLP46109 303 aaKnown RBP9.58□□□□□ -0.88
LINC00271-203ENST00000438618 FOXK2Q01167 660 aa9.58□□□□□ -0.88
LINC00271-203ENST00000438618 UBAP2LQ14157 1087 aaKnown RBP9.58□□□□□ -0.88
LINC00271-203ENST00000438618 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
LINC00271-203ENST00000438618 NLRP8Q86W28 1048 aa9.58□□□□□ -0.88
LINC00271-203ENST00000438618 EDARADDQ8WWZ3 215 aa9.58□□□□□ -0.88
LINC00271-203ENST00000438618 ZCCHC2Q9C0B9 1178 aaKnown RBP9.58□□□□□ -0.88
LINC00271-203ENST00000438618 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
LINC00271-203ENST00000438618 TUBGCP6Q96RT7 1819 aa9.58□□□□□ -0.88
LINC00271-203ENST00000438618 CNTNAP4Q9C0A0 1308 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 TAF1LQ8IZX4 1826 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 A0A1W2PNR3 127 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 GNAT3A8MTJ3 354 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 USP17L5A8MUK1 530 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 IGHA1P01876 353 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 GYS1P13807 737 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 CTBSQ01459 385 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 INTS5Q6P9B9 1019 aaKnown RBP9.57□□□□□ -0.88
LINC00271-203ENST00000438618 DNAJC10Q8IXB1 793 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
LINC00271-203ENST00000438618 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 PARP3Q9Y6F1 533 aa9.57□□□□□ -0.88
LINC00271-203ENST00000438618 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
LINC00271-203ENST00000438618 ATP4AP20648 1035 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00271-203ENST00000438618 TEFQ10587 303 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 TRIM50Q86XT4 487 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 IL17REQ8NFR9 667 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 PHACTR3Q96KR7 559 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
LINC00271-203ENST00000438618 A0A0G2JLW4 131 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 DCDC2BA2VCK2 349 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 KHNYNO15037 678 aaKnown RBP9.55□□□□□ -0.88
LINC00271-203ENST00000438618 CYP19A1P11511 503 aaPredicted RBP9.55□□□□□ -0.88
LINC00271-203ENST00000438618 TGFB2P61812 414 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 MTFR1Q15390 333 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 NEUROD4Q9HD90 331 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 ZNF358Q9NW07 568 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 SRP68Q9UHB9 627 aaKnown RBP9.55□□□□□ -0.88
LINC00271-203ENST00000438618 MKL2Q9ULH7 1088 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 COL24A1Q17RW2 1714 aa9.55□□□□□ -0.88
LINC00271-203ENST00000438618 POM121CA8CG34 1229 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 C2CD2LO14523 706 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 STARD3NLO95772 234 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 NDFIP2Q9NV92 336 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 ZDHHC3Q9NYG2 299 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
LINC00271-203ENST00000438618 UBR3Q6ZT12 1888 aa9.53□□□□□ -0.88
LINC00271-203ENST00000438618 CANXP27824 592 aaKnown RBP9.53□□□□□ -0.88
LINC00271-203ENST00000438618 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
LINC00271-203ENST00000438618 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
LINC00271-203ENST00000438618 TEX13AQ9BXU3 409 aaPredicted RBP9.53□□□□□ -0.88
LINC00271-203ENST00000438618 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
LINC00271-203ENST00000438618 USP3Q9Y6I4 520 aa9.53□□□□□ -0.88
LINC00271-203ENST00000438618 BTBD11A6QL63 1104 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 MAPTP10636 758 aaKnown RBP9.52□□□□□ -0.89
LINC00271-203ENST00000438618 DPEP1P16444 411 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 CD33P20138 364 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 TM4SF1P30408 202 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 SNRPNP63162 240 aaKnown RBP9.52□□□□□ -0.89
LINC00271-203ENST00000438618 ZNF790Q6PG37 636 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 C1orf229Q6ZS94 237 aaPredicted RBP9.52□□□□□ -0.89
LINC00271-203ENST00000438618 RTF1Q92541 710 aaKnown RBP9.52□□□□□ -0.89
LINC00271-203ENST00000438618 DNAAF2Q9NVR5 837 aaKnown RBP9.52□□□□□ -0.89
LINC00271-203ENST00000438618 SCHIP1Q9P0W5 487 aaPredicted RBP9.52□□□□□ -0.89
LINC00271-203ENST00000438618 NARFQ9UHQ1 456 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 PRR12Q9ULL5 1215 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 BCS1LQ9Y276 419 aa9.52□□□□□ -0.89
LINC00271-203ENST00000438618 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
LINC00271-203ENST00000438618 NEURL1BA8MQ27 555 aa9.51□□□□□ -0.89
LINC00271-203ENST00000438618 NEFMP07197 916 aa9.51□□□□□ -0.89
LINC00271-203ENST00000438618 SUZ12Q15022 739 aaKnown RBP9.51□□□□□ -0.89
LINC00271-203ENST00000438618 SLCO4C1Q6ZQN7 724 aa9.51□□□□□ -0.89
LINC00271-203ENST00000438618 ARHGAP27Q6ZUM4 889 aa9.51□□□□□ -0.89
LINC00271-203ENST00000438618 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
LINC00271-203ENST00000438618 ZIC5Q96T25 663 aa9.51□□□□□ -0.89
LINC00271-203ENST00000438618 CHMP3Q9Y3E7 222 aa9.51□□□□□ -0.89
LINC00271-203ENST00000438618 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
LINC00271-203ENST00000438618 CHD4Q14839 1912 aa9.5□□□□□ -0.89
LINC00271-203ENST00000438618 A0A087WZG4 1122 aa9.5□□□□□ -0.89
LINC00271-203ENST00000438618 USP17L3A6NCW0 530 aa9.5□□□□□ -0.89
LINC00271-203ENST00000438618 USP17L4A6NCW7 530 aa9.5□□□□□ -0.89
LINC00271-203ENST00000438618 PIK3R2O00459 728 aa9.5□□□□□ -0.89
LINC00271-203ENST00000438618 MSTNO14793 375 aa9.5□□□□□ -0.89
LINC00271-203ENST00000438618 KCNQ3O43525 872 aa9.5□□□□□ -0.89
LINC00271-203ENST00000438618 ARAFP10398 606 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms