RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 PDE1AP54750 535 aa19.63■□□□□ 0.73
SNRPB-202ENST00000438552 STAP2Q9UGK3 403 aa19.63■□□□□ 0.73
SNRPB-202ENST00000438552 GLRX3O76003 335 aaKnown RBP19.62■□□□□ 0.73
SNRPB-202ENST00000438552 MAP3K12Q12852 859 aa19.62■□□□□ 0.73
SNRPB-202ENST00000438552 CDC42EP5Q6NZY7 148 aa19.62■□□□□ 0.73
SNRPB-202ENST00000438552 ADGRA1Q86SQ6 560 aa19.62■□□□□ 0.73
SNRPB-202ENST00000438552 MAGEB6Q8N7X4 407 aa19.62■□□□□ 0.73
SNRPB-202ENST00000438552 FAM163AQ96GL9 167 aaPredicted RBP19.62■□□□□ 0.73
SNRPB-202ENST00000438552 TCP10L2B9ZVM9 353 aa19.61■□□□□ 0.73
SNRPB-202ENST00000438552 PDE4AP27815 886 aa19.61■□□□□ 0.73
SNRPB-202ENST00000438552 CENPQQ7L2Z9 268 aaPredicted RBP19.61■□□□□ 0.73
SNRPB-202ENST00000438552 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
SNRPB-202ENST00000438552 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
SNRPB-202ENST00000438552 ZNF408Q9H9D4 720 aa19.61■□□□□ 0.73
SNRPB-202ENST00000438552 TMOD2Q9NZR1 351 aa19.61■□□□□ 0.73
SNRPB-202ENST00000438552 RFX7Q2KHR2 1363 aa19.6■□□□□ 0.73
SNRPB-202ENST00000438552 LDHCP07864 332 aa19.6■□□□□ 0.73
SNRPB-202ENST00000438552 PDE6AP16499 860 aa19.6■□□□□ 0.73
SNRPB-202ENST00000438552 CYP7A1P22680 504 aa19.6■□□□□ 0.73
SNRPB-202ENST00000438552 PRAMEF18Q5VWM3 479 aa19.6■□□□□ 0.73
SNRPB-202ENST00000438552 PLEKHM2Q8IWE5 1019 aa19.6■□□□□ 0.73
SNRPB-202ENST00000438552 USP40Q9NVE5 1235 aa19.6■□□□□ 0.73
SNRPB-202ENST00000438552 CNTNAP1P78357 1384 aa19.59■□□□□ 0.73
SNRPB-202ENST00000438552 SSC5DA1L4H1 1573 aa19.59■□□□□ 0.73
SNRPB-202ENST00000438552 GPR75-ASB3A0A0A6YYF3 556 aa19.59■□□□□ 0.73
SNRPB-202ENST00000438552 SLC9C2Q5TAH2 1124 aa19.59■□□□□ 0.73
SNRPB-202ENST00000438552 DEFB129Q9H1M3 183 aa19.59■□□□□ 0.73
SNRPB-202ENST00000438552 NAV1Q8NEY1 1877 aa19.58■□□□□ 0.73
SNRPB-202ENST00000438552 PAPPA2Q9BXP8 1791 aa19.58■□□□□ 0.73
SNRPB-202ENST00000438552 IGSF3O75054 1194 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 CELF2O95319 508 aaKnown RBP19.58■□□□□ 0.72
SNRPB-202ENST00000438552 CHGBP05060 677 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 HSPA6P17066 643 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 APLP1P51693 650 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 NFIAQ12857 509 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 TNFAIP1Q13829 316 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 RASA3Q14644 834 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 MIGA1Q8NAN2 632 aa19.58■□□□□ 0.72
SNRPB-202ENST00000438552 NOL10Q9BSC4 688 aaKnown RBP19.58■□□□□ 0.72
SNRPB-202ENST00000438552 AATFQ9NY61 560 aaKnown RBP eCLIP19.58■□□□□ 0.726e-13■■■□□ 17.4
SNRPB-202ENST00000438552 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
SNRPB-202ENST00000438552 TCRBV5S4A2TA0A5A2 114 aa19.57■□□□□ 0.72
SNRPB-202ENST00000438552 RHBDL3P58872 404 aa19.57■□□□□ 0.72
SNRPB-202ENST00000438552 CDAN1Q8IWY9 1227 aa19.57■□□□□ 0.72
SNRPB-202ENST00000438552 KBTBD3Q8NAB2 608 aa19.57■□□□□ 0.72
SNRPB-202ENST00000438552 SH3RF3Q8TEJ3 882 aaPredicted RBP19.57■□□□□ 0.72
SNRPB-202ENST00000438552 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.72
SNRPB-202ENST00000438552 TMEM39BQ9GZU3 492 aa19.57■□□□□ 0.72
SNRPB-202ENST00000438552 OTOFQ9HC10 1997 aa19.57■□□□□ 0.72
SNRPB-202ENST00000438552 DDX60LQ5H9U9 1706 aaKnown RBP19.56■□□□□ 0.72
SNRPB-202ENST00000438552 ADD2P35612 726 aa19.56■□□□□ 0.72
SNRPB-202ENST00000438552 TNNI2P48788 182 aa19.56■□□□□ 0.72
SNRPB-202ENST00000438552 DYNLL1P63167 89 aaKnown RBP19.56■□□□□ 0.72
SNRPB-202ENST00000438552 HTRA3P83110 453 aa19.56■□□□□ 0.72
SNRPB-202ENST00000438552 CST9Q5W186 159 aa19.56■□□□□ 0.72
SNRPB-202ENST00000438552 OSBPL3Q9H4L5 887 aa19.56■□□□□ 0.72
SNRPB-202ENST00000438552 FAM198AQ9UFP1 575 aa19.56■□□□□ 0.72
SNRPB-202ENST00000438552 PPP2R3BQ9Y5P8 575 aa19.56■□□□□ 0.72
SNRPB-202ENST00000438552 WDHD1O75717 1129 aaPredicted RBP19.55■□□□□ 0.72
SNRPB-202ENST00000438552 TCP10Q12799 353 aa19.55■□□□□ 0.72
SNRPB-202ENST00000438552 FKBP1CQ5VVH2 108 aa19.55■□□□□ 0.72
SNRPB-202ENST00000438552 ERICH6BQ5W0A0 696 aa19.55■□□□□ 0.72
SNRPB-202ENST00000438552 TEX11Q8IYF3 940 aa19.55■□□□□ 0.72
SNRPB-202ENST00000438552 FSD1Q9BTV5 496 aa19.55■□□□□ 0.72
SNRPB-202ENST00000438552 DDX4Q9NQI0 724 aaKnown RBP19.55■□□□□ 0.72
SNRPB-202ENST00000438552 RPAP1Q9BWH6 1393 aaPredicted RBP19.55■□□□□ 0.72
SNRPB-202ENST00000438552 MYH1P12882 1939 aa19.55■□□□□ 0.72
SNRPB-202ENST00000438552 TMEM88BA6NKF7 163 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 BAG3O95817 575 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 RGS3P49796 1198 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 PICALMQ13492 652 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 TMED8Q6PL24 325 aaPredicted RBP19.54■□□□□ 0.72
SNRPB-202ENST00000438552 FAM83AQ86UY5 434 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 TEPSINQ96N21 525 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 PPP4R2Q9NY27 417 aa19.54■□□□□ 0.72
SNRPB-202ENST00000438552 SIPA1L1O43166 1804 aa19.53■□□□□ 0.72
SNRPB-202ENST00000438552 PPP4CP60510 307 aa19.53■□□□□ 0.72
SNRPB-202ENST00000438552 NBPF12Q5TAG4 269 aaPredicted RBP19.53■□□□□ 0.72
SNRPB-202ENST00000438552 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
SNRPB-202ENST00000438552 IDI2Q9BXS1 227 aa19.53■□□□□ 0.72
SNRPB-202ENST00000438552 MAGEB6P1A0A0J9YX57 407 aa19.52■□□□□ 0.72
SNRPB-202ENST00000438552 PLCG2P16885 1265 aa19.52■□□□□ 0.72
SNRPB-202ENST00000438552 UBE3CQ15386 1083 aa19.52■□□□□ 0.72
SNRPB-202ENST00000438552 ZFPM1Q8IX07 1006 aa19.52■□□□□ 0.72
SNRPB-202ENST00000438552 FAM151AQ8WW52 585 aa19.52■□□□□ 0.72
SNRPB-202ENST00000438552 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.72
SNRPB-202ENST00000438552 GBA2Q9HCG7 927 aaPredicted RBP19.52■□□□□ 0.72
SNRPB-202ENST00000438552 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
SNRPB-202ENST00000438552 TRIM6-TRIM34B2RNG4 842 aa19.51■□□□□ 0.71
SNRPB-202ENST00000438552 NF2P35240 595 aa19.51■□□□□ 0.71
SNRPB-202ENST00000438552 PRKG1Q13976 671 aa19.51■□□□□ 0.71
SNRPB-202ENST00000438552 MOB2Q70IA6 237 aa19.51■□□□□ 0.71
SNRPB-202ENST00000438552 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
SNRPB-202ENST00000438552 EVI5LQ96CN4 794 aa19.51■□□□□ 0.71
SNRPB-202ENST00000438552 ABT1Q9ULW3 272 aaKnown RBP19.51■□□□□ 0.71
SNRPB-202ENST00000438552 FZD1Q9UP38 647 aa19.51■□□□□ 0.71
SNRPB-202ENST00000438552 BAZ2AQ9UIF9 1905 aaKnown RBP19.51■□□□□ 0.71
SNRPB-202ENST00000438552 COL2A1P02458 1487 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms