RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 GADD45BO75293 160 aaPredicted RBP12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 SLC5A1P13866 664 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 EVCP57679 992 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 PUM3Q15397 648 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 CCDC152Q4G0S7 254 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 SMARCC2Q8TAQ2 1214 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 CHAMP1Q96JM3 812 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 CCDC85AQ96PX6 553 aaPredicted RBP12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 RBSNQ9H1K0 784 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 RIC1Q4ADV7 1423 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 M0R2C6 588 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 FGFR2P21802 821 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 ADD2P35612 726 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 ATL3Q6DD88 541 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 STOX1Q6ZVD7 989 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 CNBD1Q8NA66 436 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 BRF1Q92994 677 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
ERGIC3-207ENST00000438317 ARAP2Q8WZ64 1704 aa12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 UBN2Q6ZU65 1347 aa12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 DHX16O60231 1041 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 DNM1Q05193 864 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 STK3Q13188 491 aa12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 CCDC93Q567U6 631 aa12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 NAA16Q6N069 864 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 GDPD2Q9HCC8 539 aa12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 ZNF277Q9NRM2 450 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 CFAP45Q9UL16 551 aa12.97□□□□□ -0.33
ERGIC3-207ENST00000438317 THSD7BQ9C0I4 1608 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 KLRG2A4D1S0 409 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 H3BQV1 296 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 FZD9O00144 591 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 ZNF213O14771 459 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 FGAP02671 866 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 CHGBP05060 677 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 MCM5P33992 734 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 MCAMP43121 646 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 ST5P78524 1137 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 FMR1Q06787 632 aaKnown RBP eCLIP12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 SCARF1Q14162 830 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 ALX1Q15699 326 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 CCDC102BQ68D86 513 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 NCOA7Q8NI08 942 aa12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 ABT1Q9ULW3 272 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-207ENST00000438317 LAMB2P55268 1798 aa12.96□□□□□ -0.34
ERGIC3-207ENST00000438317 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-207ENST00000438317 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
ERGIC3-207ENST00000438317 FIBPO43427 364 aa12.95□□□□□ -0.34
ERGIC3-207ENST00000438317 SCRN1Q12765 414 aa12.95□□□□□ -0.34
ERGIC3-207ENST00000438317 TRDNQ13061 729 aa12.95□□□□□ -0.34
ERGIC3-207ENST00000438317 SLC9C2Q5TAH2 1124 aa12.95□□□□□ -0.34
ERGIC3-207ENST00000438317 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
ERGIC3-207ENST00000438317 DDX60Q8IY21 1712 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 MYH15Q9Y2K3 1946 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 ESPNB1AK53 854 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 GPAA1O43292 621 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 NPR1P16066 1061 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 PDIA3P30101 505 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 CLCN1P35523 988 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 APOBRQ0VD83 1088 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 MAP3K12Q12852 859 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 COL9A3Q14050 684 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 RALYLQ86SE5 291 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 PDLIM2Q96JY6 352 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
ERGIC3-207ENST00000438317 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 NTSR2O95665 410 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 GNAT2P19087 354 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 IARSP41252 1262 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 SLFNL1Q499Z3 407 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 SLC10A5Q5PT55 438 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 CST9Q5W186 159 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 CYP4F22Q6NT55 531 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 GPC2Q8N158 579 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 SPATA5Q8NB90 893 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 CAPNS2Q96L46 248 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms