RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 SLC10A5Q5PT55 438 aa9.05□□□□□ -0.96
TOP3B-208ENST00000437929 DDX46Q7L014 1031 aaKnown RBP9.05□□□□□ -0.96
TOP3B-208ENST00000437929 CTU1Q7Z7A3 348 aaKnown RBP9.05□□□□□ -0.96
TOP3B-208ENST00000437929 GRAPLQ8TC17 118 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-208ENST00000437929 PNISRQ8TF01 805 aaKnown RBP9.05□□□□□ -0.96
TOP3B-208ENST00000437929 GLMNQ92990 594 aa9.05□□□□□ -0.96
TOP3B-208ENST00000437929 DCPSQ96C86 337 aaKnown RBP9.05□□□□□ -0.96
TOP3B-208ENST00000437929 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
TOP3B-208ENST00000437929 PLSCR2Q9NRY7 297 aa9.05□□□□□ -0.96
TOP3B-208ENST00000437929 ASTN2O75129 1339 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-208ENST00000437929 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
TOP3B-208ENST00000437929 PDE4DIPQ5VU43 2346 aa9.04□□□□□ -0.96
TOP3B-208ENST00000437929 AKAP11Q9UKA4 1901 aa9.04□□□□□ -0.96
TOP3B-208ENST00000437929 AIMP1Q12904 312 aaKnown RBP9.04□□□□□ -0.96
TOP3B-208ENST00000437929 LRP10Q7Z4F1 713 aa9.04□□□□□ -0.96
TOP3B-208ENST00000437929 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
TOP3B-208ENST00000437929 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-208ENST00000437929 UNC93B1Q9H1C4 597 aa9.04□□□□□ -0.96
TOP3B-208ENST00000437929 TRMT112Q9UI30 125 aaKnown RBP9.04□□□□□ -0.96
TOP3B-208ENST00000437929 NSFL1CQ9UNZ2 370 aaKnown RBP9.04□□□□□ -0.96
TOP3B-208ENST00000437929 POLR2AP24928 1970 aaKnown RBP9.04□□□□□ -0.96
TOP3B-208ENST00000437929 COL4A1P02462 1669 aa9.04□□□□□ -0.96
TOP3B-208ENST00000437929 LRRC37AA6NMS7 1700 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 RTL9Q8NET4 1388 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 ECE2O60344 883 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 KIF4BQ2VIQ3 1234 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 PTCRAQ6ISU1 281 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-208ENST00000437929 NLRP10Q86W26 655 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 DPF2Q92785 391 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 CDCA5Q96FF9 252 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 GGA3Q9NZ52 723 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 SCAF8Q9UPN6 1271 aaKnown RBP9.03□□□□□ -0.96
TOP3B-208ENST00000437929 ERBB4Q15303 1308 aa9.03□□□□□ -0.96
TOP3B-208ENST00000437929 ZBBXA8MT70 800 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 NEFMP07197 916 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 FBXO45P0C2W1 286 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 GPSM2P81274 684 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 NR1H3Q13133 447 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 COPS6Q7L5N1 327 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 RASAL3Q86YV0 1011 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 CELF1Q92879 486 aaKnown RBP9.02□□□□□ -0.97
TOP3B-208ENST00000437929 POLLQ9UGP5 575 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 TSPYL4Q9UJ04 414 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 SERPINA10Q9UK55 444 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 DDX60Q8IY21 1712 aaKnown RBP9.02□□□□□ -0.97
TOP3B-208ENST00000437929 SH3TC1Q8TE82 1336 aa9.02□□□□□ -0.97
TOP3B-208ENST00000437929 MKI67P46013 3256 aaKnown RBP9.01□□□□□ -0.97
TOP3B-208ENST00000437929 TBC1D8O95759 1140 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 GGCXP38435 758 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 MMRN1Q13201 1228 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 NFE2L2Q16236 605 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 HSP90AB3PQ58FF7 597 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 MOB2Q70IA6 237 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 ZNF296Q8WUU4 475 aaPredicted RBP9.01□□□□□ -0.97
TOP3B-208ENST00000437929 HDAC9Q9UKV0 1011 aa9.01□□□□□ -0.97
TOP3B-208ENST00000437929 RPS12P25398 132 aaKnown RBP9□□□□□ -0.97
TOP3B-208ENST00000437929 PTK2Q05397 1052 aa9□□□□□ -0.97
TOP3B-208ENST00000437929 SEMA3FQ13275 785 aa9□□□□□ -0.97
TOP3B-208ENST00000437929 TCIRG1Q13488 830 aa9□□□□□ -0.97
TOP3B-208ENST00000437929 SCARF1Q14162 830 aa9□□□□□ -0.97
TOP3B-208ENST00000437929 ANGEL2Q5VTE6 544 aaKnown RBP9□□□□□ -0.97
TOP3B-208ENST00000437929 ADAMTS19Q8TE59 1207 aa9□□□□□ -0.97
TOP3B-208ENST00000437929 PLEKHF1Q96S99 279 aa9□□□□□ -0.97
TOP3B-208ENST00000437929 SCN9AQ15858 1988 aa9□□□□□ -0.97
TOP3B-208ENST00000437929 AGERQ15109 404 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 KRT24Q2M2I5 525 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 PRAMEF18Q5VWM3 479 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 TMC4Q7Z404 712 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 TBC1D16Q8TBP0 767 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 FAM89AQ96GI7 184 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 EYA3Q99504 573 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 MAPK8IP3Q9UPT6 1336 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 PAPPA2Q9BXP8 1791 aa8.99□□□□□ -0.97
TOP3B-208ENST00000437929 CENPFP49454 3210 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 RNF223E7ERA6 249 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 UBE2Q2LH0YL09 131 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
TOP3B-208ENST00000437929 VIL1P09327 827 aaKnown RBP8.98□□□□□ -0.97
TOP3B-208ENST00000437929 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 HOMEZQ8IX15 550 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 BAP1Q92560 729 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 GPKOWQ92917 476 aaPredicted RBP eCLIP8.98□□□□□ -0.97
TOP3B-208ENST00000437929 ARHGAP9Q9BRR9 750 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 BRCA2P51587 3418 aa8.98□□□□□ -0.97
TOP3B-208ENST00000437929 MAGEB6P1A0A0J9YX57 407 aa8.97□□□□□ -0.97
TOP3B-208ENST00000437929 UFL1O94874 794 aa8.97□□□□□ -0.97
TOP3B-208ENST00000437929 SOX11P35716 441 aa8.97□□□□□ -0.97
TOP3B-208ENST00000437929 SF3B3Q15393 1217 aaKnown RBP8.97□□□□□ -0.97
TOP3B-208ENST00000437929 PKN2Q16513 984 aaKnown RBP8.97□□□□□ -0.97
TOP3B-208ENST00000437929 ZC3H12CQ9C0D7 883 aaKnown RBP8.97□□□□□ -0.97
TOP3B-208ENST00000437929 R3HDMLQ9H3Y0 253 aa8.97□□□□□ -0.97
TOP3B-208ENST00000437929 CHPF2Q9P2E5 772 aa8.97□□□□□ -0.97
TOP3B-208ENST00000437929 PCDHB9Q9Y5E1 797 aa8.97□□□□□ -0.97
TOP3B-208ENST00000437929 HTTP42858 3142 aa8.97□□□□□ -0.97
TOP3B-208ENST00000437929 GPR25O00155 361 aa8.96□□□□□ -0.98
TOP3B-208ENST00000437929 RIPK4P57078 832 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms