RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 FKBP1AP62942 108 aaKnown RBP13.35□□□□□ -0.27
CPNE1-214ENST00000435747 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 IRF5Q13568 498 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 MYLIPQ8WY64 445 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-214ENST00000435747 MYD88Q99836 296 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 CWC25Q9NXE8 425 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-214ENST00000435747 LAS1LQ9Y4W2 734 aaKnown RBP13.35□□□□□ -0.27
CPNE1-214ENST00000435747 TNPO2O14787 897 aaKnown RBP13.34□□□□□ -0.27
CPNE1-214ENST00000435747 PPATQ06203 517 aa13.34□□□□□ -0.27
CPNE1-214ENST00000435747 SEMA6BQ9H3T3 888 aa13.34□□□□□ -0.27
CPNE1-214ENST00000435747 GREM2Q9H772 168 aa13.34□□□□□ -0.27
CPNE1-214ENST00000435747 GNAI1P63096 354 aa13.33□□□□□ -0.28
CPNE1-214ENST00000435747 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
CPNE1-214ENST00000435747 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
CPNE1-214ENST00000435747 TTLL11Q8NHH1 800 aa13.33□□□□□ -0.28
CPNE1-214ENST00000435747 JAG2Q9Y219 1238 aa13.33□□□□□ -0.28
CPNE1-214ENST00000435747 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.28
CPNE1-214ENST00000435747 MYO9BQ13459 2157 aa13.32□□□□□ -0.28
CPNE1-214ENST00000435747 CYP2C8P10632 490 aa13.32□□□□□ -0.28
CPNE1-214ENST00000435747 C8orf58Q8NAV2 365 aa13.32□□□□□ -0.28
CPNE1-214ENST00000435747 LBHD1Q9BQE6 289 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-214ENST00000435747 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
CPNE1-214ENST00000435747 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
CPNE1-214ENST00000435747 DZIP1LQ8IYY4 767 aaKnown RBP13.31□□□□□ -0.28
CPNE1-214ENST00000435747 HOOK2Q96ED9 719 aa13.31□□□□□ -0.28
CPNE1-214ENST00000435747 MPHOSPH8Q99549 860 aa13.31□□□□□ -0.28
CPNE1-214ENST00000435747 SERPINA10Q9UK55 444 aa13.31□□□□□ -0.28
CPNE1-214ENST00000435747 KCNH4Q9UQ05 1017 aa13.31□□□□□ -0.28
CPNE1-214ENST00000435747 IL1R1P14778 569 aa13.3□□□□□ -0.28
CPNE1-214ENST00000435747 CALD1Q05682 793 aaKnown RBP13.3□□□□□ -0.28
CPNE1-214ENST00000435747 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
CPNE1-214ENST00000435747 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
CPNE1-214ENST00000435747 COA7Q96BR5 231 aa13.3□□□□□ -0.28
CPNE1-214ENST00000435747 HMX1Q9NP08 348 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-214ENST00000435747 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
CPNE1-214ENST00000435747 PFASO15067 1338 aa13.3□□□□□ -0.28
CPNE1-214ENST00000435747 SYNGAP1Q96PV0 1343 aa13.3□□□□□ -0.28
CPNE1-214ENST00000435747 HMGCRP04035 888 aa13.29□□□□□ -0.28
CPNE1-214ENST00000435747 MOGSQ13724 837 aa13.29□□□□□ -0.28
CPNE1-214ENST00000435747 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
CPNE1-214ENST00000435747 PHAXQ9H814 394 aaKnown RBP13.29□□□□□ -0.28
CPNE1-214ENST00000435747 OGDHLQ9ULD0 1010 aa13.29□□□□□ -0.28
CPNE1-214ENST00000435747 CHRNDQ07001 517 aa13.28□□□□□ -0.28
CPNE1-214ENST00000435747 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
CPNE1-214ENST00000435747 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
CPNE1-214ENST00000435747 TTYH1Q9H313 450 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-214ENST00000435747 AK9Q5TCS8 1911 aa13.28□□□□□ -0.28
CPNE1-214ENST00000435747 SNAP23O00161 211 aa13.27□□□□□ -0.29
CPNE1-214ENST00000435747 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-214ENST00000435747 INPP5BP32019 993 aa13.27□□□□□ -0.29
CPNE1-214ENST00000435747 CRKP46108 304 aa13.27□□□□□ -0.29
CPNE1-214ENST00000435747 MFSD14BQ5SR56 506 aa13.27□□□□□ -0.29
CPNE1-214ENST00000435747 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
CPNE1-214ENST00000435747 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
CPNE1-214ENST00000435747 IL16Q14005 1332 aa13.27□□□□□ -0.29
CPNE1-214ENST00000435747 CACNA1AO00555 2505 aa13.27□□□□□ -0.29
CPNE1-214ENST00000435747 ITGA6P23229 1130 aa13.26□□□□□ -0.29
CPNE1-214ENST00000435747 CACNB3P54284 484 aa13.26□□□□□ -0.29
CPNE1-214ENST00000435747 LRRC26Q2I0M4 334 aa13.26□□□□□ -0.29
CPNE1-214ENST00000435747 GPAT2Q6NUI2 795 aa13.26□□□□□ -0.29
CPNE1-214ENST00000435747 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
CPNE1-214ENST00000435747 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
CPNE1-214ENST00000435747 HCN4Q9Y3Q4 1203 aa13.26□□□□□ -0.29
CPNE1-214ENST00000435747 ARIH1Q9Y4X5 557 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-214ENST00000435747 ANP32CO43423 234 aa13.25□□□□□ -0.29
CPNE1-214ENST00000435747 TAF5LO75529 589 aa13.25□□□□□ -0.29
CPNE1-214ENST00000435747 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
CPNE1-214ENST00000435747 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
CPNE1-214ENST00000435747 SMCR8Q8TEV9 937 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-214ENST00000435747 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-214ENST00000435747 C1QTNF1Q9BXJ1 281 aa13.25□□□□□ -0.29
CPNE1-214ENST00000435747 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
CPNE1-214ENST00000435747 CXCL11O14625 94 aa13.24□□□□□ -0.29
CPNE1-214ENST00000435747 COL6A1P12109 1028 aa13.24□□□□□ -0.29
CPNE1-214ENST00000435747 SMAD3P84022 425 aaKnown RBP13.24□□□□□ -0.29
CPNE1-214ENST00000435747 TRIM32Q13049 653 aa13.24□□□□□ -0.29
CPNE1-214ENST00000435747 FASTKD5Q7L8L6 764 aaKnown RBP13.24□□□□□ -0.29
CPNE1-214ENST00000435747 FAM83AQ86UY5 434 aa13.24□□□□□ -0.29
CPNE1-214ENST00000435747 SNX27Q96L92 541 aa13.24□□□□□ -0.29
CPNE1-214ENST00000435747 UHRF1Q96T88 793 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-214ENST00000435747 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
CPNE1-214ENST00000435747 SHHQ15465 462 aa13.23□□□□□ -0.29
CPNE1-214ENST00000435747 CCDC30Q5VVM6 783 aa13.23□□□□□ -0.29
CPNE1-214ENST00000435747 ATXN2LQ8WWM7 1075 aaKnown RBP13.23□□□□□ -0.29
CPNE1-214ENST00000435747 PRKAG2Q9UGJ0 569 aa13.23□□□□□ -0.29
CPNE1-214ENST00000435747 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
CPNE1-214ENST00000435747 LTBP2Q14767 1821 aa13.23□□□□□ -0.29
CPNE1-214ENST00000435747 MAST2Q6P0Q8 1798 aa13.22□□□□□ -0.29
CPNE1-214ENST00000435747 RPAP1Q9BWH6 1393 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-214ENST00000435747 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
CPNE1-214ENST00000435747 GADL1Q6ZQY3 521 aa13.22□□□□□ -0.29
CPNE1-214ENST00000435747 ANKRD13CQ8N6S4 541 aa13.22□□□□□ -0.29
CPNE1-214ENST00000435747 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
CPNE1-214ENST00000435747 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-214ENST00000435747 SLC45A1Q9Y2W3 748 aa13.22□□□□□ -0.29
CPNE1-214ENST00000435747 PTPRFP10586 1907 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 IGKV5-2P06315 115 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms