RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 UQCRHP07919 91 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 METAP2P50579 478 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLK1-205ENST00000434813 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
CLK1-205ENST00000434813 MAP3K12Q12852 859 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 IQCB1Q15051 598 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 FMR1NBQ8N0W7 255 aaPredicted RBP21.65■■□□□ 1.06
CLK1-205ENST00000434813 NKX2-3Q8TAU0 364 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 STK38Q15208 465 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 CCDC152Q4G0S7 254 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 APOA5Q6Q788 366 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 EPB41L4AQ9HCS5 686 aaPredicted RBP21.65■■□□□ 1.06
CLK1-205ENST00000434813 BCORQ6W2J9 1755 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 POTEAQ6S8J7 498 aa21.64■■□□□ 1.05
CLK1-205ENST00000434813 SARM1Q6SZW1 724 aa21.64■■□□□ 1.05
CLK1-205ENST00000434813 C11orf57Q6ZUT1 292 aaPredicted RBP21.64■■□□□ 1.05
CLK1-205ENST00000434813 TRIM5Q9C035 493 aa21.64■■□□□ 1.05
CLK1-205ENST00000434813 B4E1Z4 1266 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 PATL2C9JE40 543 aaKnown RBP21.63■■□□□ 1.05
CLK1-205ENST00000434813 NTSR2O95665 410 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 RBM6P78332 1123 aaKnown RBP21.63■■□□□ 1.05
CLK1-205ENST00000434813 SGMS1Q86VZ5 419 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 C17orf53Q8N3J3 647 aaPredicted RBP21.63■■□□□ 1.05
CLK1-205ENST00000434813 MAGEB6Q8N7X4 407 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 SEC31BQ9NQW1 1179 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 CLIC4Q9Y696 253 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 MYH14Q7Z406 1995 aaKnown RBP21.63■■□□□ 1.05
CLK1-205ENST00000434813 KIF28PB7ZC32 967 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 MBD4O95243 580 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 RXRBP28702 533 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 CDC25BP30305 580 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 IFNL3Q8IZI9 196 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 PYCARDQ9ULZ3 195 aa21.63■■□□□ 1.05
CLK1-205ENST00000434813 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
CLK1-205ENST00000434813 PTGS1P23219 599 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 COL5A3P25940 1745 aaPredicted RBP21.62■■□□□ 1.05
CLK1-205ENST00000434813 CPLX2Q6PUV4 134 aaKnown RBP21.62■■□□□ 1.05
CLK1-205ENST00000434813 IGDCC4Q8TDY8 1250 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 NAPBQ9H115 298 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 ANO10Q9NW15 660 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 GOLGA6L19H0YKK7 550 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 SPTLC2O15270 562 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 IGHMBP2P38935 993 aaKnown RBP21.62■■□□□ 1.05
CLK1-205ENST00000434813 SF3A1Q15459 793 aaKnown RBP21.62■■□□□ 1.05
CLK1-205ENST00000434813 DNTTIP2Q5QJE6 756 aaKnown RBP21.62■■□□□ 1.05
CLK1-205ENST00000434813 FAM182BQ5T319 152 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 LY9Q9HBG7 655 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 GJB4Q9NTQ9 266 aa21.62■■□□□ 1.05
CLK1-205ENST00000434813 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
CLK1-205ENST00000434813 LIFRP42702 1097 aa21.61■■□□□ 1.05
CLK1-205ENST00000434813 PRIMPOLQ96LW4 560 aa21.61■■□□□ 1.05
CLK1-205ENST00000434813 CNNM2Q9H8M5 875 aa21.61■■□□□ 1.05
CLK1-205ENST00000434813 ZNF652Q9Y2D9 606 aa21.61■■□□□ 1.05
CLK1-205ENST00000434813 NID2Q14112 1375 aa21.61■■□□□ 1.05
CLK1-205ENST00000434813 FAM177BA6PVY3 158 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 DYNC1I1O14576 645 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 ZBTB43O43298 467 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 GNAT2P19087 354 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 ANO1Q5XXA6 986 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 SYNE3Q6ZMZ3 975 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 LINC00116Q8NCU8 138 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 ALG1Q9BT22 464 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 NIP7Q9Y221 180 aaKnown RBP eCLIP21.6■■□□□ 1.05
CLK1-205ENST00000434813 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 SNAP23O00161 211 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 CDC27P30260 824 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 NDUFA8P51970 172 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 MICU3Q86XE3 530 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 ARMT1Q9H993 441 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 SENP2Q9HC62 589 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 A0A1B0GUL6 1792 aa21.6■■□□□ 1.05
CLK1-205ENST00000434813 STK36Q9NRP7 1315 aa21.59■■□□□ 1.05
CLK1-205ENST00000434813 A0A1B0GVL5 298 aa21.59■■□□□ 1.05
CLK1-205ENST00000434813 HSP90AA2PQ14568 343 aaPredicted RBP21.59■■□□□ 1.05
CLK1-205ENST00000434813 TMEM67Q5HYA8 995 aa21.59■■□□□ 1.05
CLK1-205ENST00000434813 PTF1AQ7RTS3 328 aa21.59■■□□□ 1.05
CLK1-205ENST00000434813 CCDC186Q7Z3E2 898 aa21.59■■□□□ 1.05
CLK1-205ENST00000434813 CEP57L1Q8IYX8 460 aa21.59■■□□□ 1.05
CLK1-205ENST00000434813 GSG1L2A8MUP6 293 aa21.58■■□□□ 1.05
CLK1-205ENST00000434813 ONECUT3O60422 494 aaPredicted RBP21.58■■□□□ 1.05
CLK1-205ENST00000434813 NTRK3Q16288 839 aa21.58■■□□□ 1.05
CLK1-205ENST00000434813 DRC7Q8IY82 874 aa21.58■■□□□ 1.05
CLK1-205ENST00000434813 SEPT12Q8IYM1 358 aa21.58■■□□□ 1.05
CLK1-205ENST00000434813 GOLGA8AA7E2F4 631 aa21.58■■□□□ 1.04
CLK1-205ENST00000434813 AKNAD1Q5T1N1 836 aa21.58■■□□□ 1.04
CLK1-205ENST00000434813 KRT40Q6A162 431 aa21.58■■□□□ 1.04
CLK1-205ENST00000434813 VPS37DQ86XT2 251 aa21.58■■□□□ 1.04
CLK1-205ENST00000434813 DHX40Q8IX18 779 aaKnown RBP21.58■■□□□ 1.04
CLK1-205ENST00000434813 MRFAP1L1Q96HT8 127 aa21.58■■□□□ 1.04
CLK1-205ENST00000434813 KRT23Q9C075 422 aa21.58■■□□□ 1.04
CLK1-205ENST00000434813 COL4A1P02462 1669 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 RXRAP19793 462 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 BCAMP50895 628 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 KCNQ4P56696 695 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 CTDSPL2Q05D32 466 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 AXDND1Q5T1B0 1012 aaPredicted RBP21.57■■□□□ 1.04
CLK1-205ENST00000434813 NFXL1Q6ZNB6 911 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 MYRIPQ8NFW9 859 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 AIFM3Q96NN9 605 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 SDF4Q9BRK5 362 aa21.57■■□□□ 1.04
CLK1-205ENST00000434813 NACAP1Q9BZK3 213 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms