RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 EPB41L4AQ9HCS5 686 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-212ENST00000432645 GOLGA8BA8MQT2 603 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 RXRAP19793 462 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 UBE2HP62256 183 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 KRT85P78386 507 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 CYB5R4Q7L1T6 521 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 TMEM87AQ8NBN3 555 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 FAM84BQ96KN1 310 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 CYP7A1P22680 504 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 TTC6Q86TZ1 520 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 SMARCC2Q8TAQ2 1214 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 ZNF274Q96GC6 653 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 TOMM22Q9NS69 142 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 SLC4A4Q9Y6R1 1079 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 CICQ96RK0 1608 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 LAMA4Q16363 1823 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 GSG1L2A8MUP6 293 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 KDM4AO75164 1064 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 TRIM37O94972 964 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 TDO2P48775 406 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 SETQ01105 290 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 UBE4AQ14139 1066 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 NFIXQ14938 502 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 RRP12Q5JTH9 1297 aaKnown RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 SDR42E1Q8WUS8 393 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 SYAP1Q96A49 352 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 SENP2Q9HC62 589 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 GNL3LQ9NVN8 582 aaKnown RBP9.76□□□□□ -0.85
HDAC9-212ENST00000432645 THSD7AQ9UPZ6 1657 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 NEDD4P46934 1319 aa9.76□□□□□ -0.85
HDAC9-212ENST00000432645 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
HDAC9-212ENST00000432645 ATRNO75882 1429 aa9.75□□□□□ -0.85
HDAC9-212ENST00000432645 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-212ENST00000432645 OTUD7BQ6GQQ9 843 aa9.75□□□□□ -0.85
HDAC9-212ENST00000432645 CCDC144CPQ8IYA2 1237 aa9.75□□□□□ -0.85
HDAC9-212ENST00000432645 TRIM44Q96DX7 344 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-212ENST00000432645 LLPHQ9BRT6 129 aaKnown RBP9.75□□□□□ -0.85
HDAC9-212ENST00000432645 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-212ENST00000432645 TXNRD3Q86VQ6 643 aa9.75□□□□□ -0.85
HDAC9-212ENST00000432645 SMIM22K7EJ46 135 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 TM4SF1P30408 202 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 DNTTIP2Q5QJE6 756 aaKnown RBP9.74□□□□□ -0.85
HDAC9-212ENST00000432645 SPATA32Q96LK8 384 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 PRDM16Q9HAZ2 1276 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 GJB4Q9NTQ9 266 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 HPS5Q9UPZ3 1129 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 ZNF804BA4D1E1 1349 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 CPLX1O14810 134 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 FDPSP14324 419 aaKnown RBP9.74□□□□□ -0.85
HDAC9-212ENST00000432645 HMGN5P82970 282 aaKnown RBP9.74□□□□□ -0.85
HDAC9-212ENST00000432645 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 CNBD1Q8NA66 436 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 ZKSCAN3Q9BRR0 538 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 MYL10Q9BUA6 226 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 FTOQ9C0B1 505 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC9-212ENST00000432645 MYH7P12883 1935 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 COL1A1P02452 1464 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-212ENST00000432645 MINDY4BA8MYZ0 360 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 ADD1P35611 737 aaKnown RBP9.74□□□□□ -0.85
HDAC9-212ENST00000432645 RESTQ13127 1097 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 ZSWIM5Q9P217 1185 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 ANKIB1Q9P2G1 1089 aa9.74□□□□□ -0.85
HDAC9-212ENST00000432645 ANGEL1Q9UNK9 670 aaKnown RBP9.74□□□□□ -0.85
HDAC9-212ENST00000432645 NHSQ6T4R5 1651 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 GOLGA6L4A6NEF3 574 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 DYNLL1P63167 89 aaKnown RBP9.73□□□□□ -0.85
HDAC9-212ENST00000432645 GIMAP6Q6P9H5 292 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 NACAP1Q9BZK3 213 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 MAGEB6P1A0A0J9YX57 407 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 HIBADHP31937 336 aaKnown RBP9.73□□□□□ -0.85
HDAC9-212ENST00000432645 EVCP57679 992 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 ZNF831Q5JPB2 1677 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 CCDC183Q5T5S1 534 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 KRT27Q7Z3Y8 459 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 FBXL16Q8N461 479 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 LEO1Q8WVC0 666 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-212ENST00000432645 GPR101Q96P66 508 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-212ENST00000432645 SALL1Q9NSC2 1324 aa9.73□□□□□ -0.85
HDAC9-212ENST00000432645 SCN7AQ01118 1682 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-212ENST00000432645 CAMK4Q16566 473 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 TMEM67Q5HYA8 995 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 MFSD6Q6ZSS7 791 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 ZNF384Q8TF68 577 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 SCAND2PQ9GZW5 306 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-212ENST00000432645 TSPY26PQ9H489 355 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 ORC3Q9UBD5 711 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-212ENST00000432645 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 LAMB2P55268 1798 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 ARAP2Q8WZ64 1704 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 CYP2D7A0A087X1C5 515 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 SH2B2O14492 632 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-212ENST00000432645 IFIT3O14879 490 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms