RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
USP40-205ENST00000430158 PAG1Q9NWQ8 432 aa15.13■□□□□ 0.01
USP40-205ENST00000430158 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
USP40-205ENST00000430158 GOLIM4O00461 696 aa15.12■□□□□ 0.01
USP40-205ENST00000430158 GLRX3O76003 335 aaKnown RBP15.12■□□□□ 0.01
USP40-205ENST00000430158 ADGRA1Q86SQ6 560 aa15.12■□□□□ 0.01
USP40-205ENST00000430158 DNAJC2Q99543 621 aaKnown RBP15.12■□□□□ 0.01
USP40-205ENST00000430158 LRP2BPQ9P2M1 347 aa15.12■□□□□ 0.01
USP40-205ENST00000430158 PITPNM2Q9BZ72 1349 aa15.12■□□□□ 0.01
USP40-205ENST00000430158 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 TTF1Q15361 905 aaPredicted RBP15.11■□□□□ 0.01
USP40-205ENST00000430158 MAP1SQ66K74 1059 aaPredicted RBP15.11■□□□□ 0.01
USP40-205ENST00000430158 GPATCH3Q96I76 525 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 DCBLD2Q96PD2 775 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 GGA3Q9NZ52 723 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 RAI14Q9P0K7 980 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 CDK5RAP2Q96SN8 1893 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 MROH7-TTC4A0A0A0MT08 1334 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 PASKQ96RG2 1323 aa15.11■□□□□ 0.01
USP40-205ENST00000430158 ERC2O15083 957 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 CHGBP05060 677 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 RHBDL3P58872 404 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 FSTL1Q12841 308 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 ANGEL2Q5VTE6 544 aaKnown RBP15.1■□□□□ 0.01
USP40-205ENST00000430158 CDC42EP5Q6NZY7 148 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 TMED8Q6PL24 325 aaPredicted RBP15.1■□□□□ 0.01
USP40-205ENST00000430158 DLK2Q6UY11 383 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 DZIP1Q86YF9 867 aaKnown RBP15.1■□□□□ 0.01
USP40-205ENST00000430158 CNTROBQ8N137 903 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 SMC1BQ8NDV3 1235 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
USP40-205ENST00000430158 ZNF70Q9UC06 446 aaPredicted RBP15.1■□□□□ 0.01
USP40-205ENST00000430158 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
USP40-205ENST00000430158 RFX7Q2KHR2 1363 aa15.1■□□□□ 0.01
USP40-205ENST00000430158 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
USP40-205ENST00000430158 PDE6AP16499 860 aa15.09■□□□□ 0.01
USP40-205ENST00000430158 PPP4CP60510 307 aa15.09■□□□□ 0.01
USP40-205ENST00000430158 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
USP40-205ENST00000430158 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
USP40-205ENST00000430158 KBTBD3Q8NAB2 608 aa15.09■□□□□ 0.01
USP40-205ENST00000430158 GLIS2Q9BZE0 524 aaPredicted RBP15.09■□□□□ 0.01
USP40-205ENST00000430158 TRPM7Q96QT4 1865 aa15.09■□□□□ 0.01
USP40-205ENST00000430158 LDHCP07864 332 aa15.08■□□□□ 0
USP40-205ENST00000430158 ADD2P35612 726 aa15.08■□□□□ 0
USP40-205ENST00000430158 RBM5P52756 815 aaKnown RBP eCLIP15.08■□□□□ 0
USP40-205ENST00000430158 GSTO1P78417 241 aa15.08■□□□□ 0
USP40-205ENST00000430158 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0
USP40-205ENST00000430158 MAP3K12Q12852 859 aa15.08■□□□□ 0
USP40-205ENST00000430158 FKBP1CQ5VVH2 108 aa15.08■□□□□ 0
USP40-205ENST00000430158 NAA16Q6N069 864 aaPredicted RBP15.08■□□□□ 0
USP40-205ENST00000430158 SCAF8Q9UPN6 1271 aaKnown RBP15.08■□□□□ 0
USP40-205ENST00000430158 CNTNAP1P78357 1384 aa15.08■□□□□ 0
USP40-205ENST00000430158 CLRN2A0PK11 232 aa15.07■□□□□ 0
USP40-205ENST00000430158 ADM5C9JUS6 153 aa15.07■□□□□ 0
USP40-205ENST00000430158 TRAF5O00463 557 aa15.07■□□□□ 0
USP40-205ENST00000430158 WDHD1O75717 1129 aaPredicted RBP15.07■□□□□ 0
USP40-205ENST00000430158 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
USP40-205ENST00000430158 CYP7A1P22680 504 aa15.07■□□□□ 0
USP40-205ENST00000430158 BTDP43251 543 aa15.07■□□□□ 0
USP40-205ENST00000430158 SLC9C2Q5TAH2 1124 aa15.07■□□□□ 0
USP40-205ENST00000430158 CDC37L1Q7L3B6 337 aa15.07■□□□□ 0
USP40-205ENST00000430158 KRT26Q7Z3Y9 468 aa15.07■□□□□ 0
USP40-205ENST00000430158 USP48Q86UV5 1035 aa15.07■□□□□ 0
USP40-205ENST00000430158 SLF2Q8IX21 1173 aa15.07■□□□□ 0
USP40-205ENST00000430158 MAGEB6Q8N7X4 407 aa15.07■□□□□ 0
USP40-205ENST00000430158 FOCADQ5VW36 1801 aa15.07■□□□□ 0
USP40-205ENST00000430158 CACNB3P54284 484 aa15.06■□□□□ 0
USP40-205ENST00000430158 NFIAQ12857 509 aa15.06■□□□□ 0
USP40-205ENST00000430158 UBE3CQ15386 1083 aa15.06■□□□□ 0
USP40-205ENST00000430158 DCPSQ96C86 337 aaKnown RBP15.06■□□□□ 0
USP40-205ENST00000430158 TEPSINQ96N21 525 aa15.06■□□□□ 0
USP40-205ENST00000430158 RIOK1Q9BRS2 568 aaKnown RBP15.06■□□□□ 0
USP40-205ENST00000430158 IDI2Q9BXS1 227 aa15.06■□□□□ 0
USP40-205ENST00000430158 USP40Q9NVE5 1235 aa15.06■□□□□ 0
USP40-205ENST00000430158 FAM198AQ9UFP1 575 aa15.06■□□□□ 0
USP40-205ENST00000430158 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
USP40-205ENST00000430158 AK9Q5TCS8 1911 aa15.05■□□□□ 0
USP40-205ENST00000430158 GSPT1P15170 499 aaKnown RBP15.05■□□□□ -0
USP40-205ENST00000430158 APOBEC3FQ8IUX4 373 aaKnown RBP15.05■□□□□ -0
USP40-205ENST00000430158 EVI5LQ96CN4 794 aa15.05■□□□□ -0
USP40-205ENST00000430158 DEFB129Q9H1M3 183 aa15.05■□□□□ -0
USP40-205ENST00000430158 DDX4Q9NQI0 724 aaKnown RBP15.05■□□□□ -0
USP40-205ENST00000430158 RNF113AO15541 343 aaKnown RBP15.04■□□□□ -0
USP40-205ENST00000430158 MYO1BO43795 1136 aa15.04■□□□□ -0
USP40-205ENST00000430158 C1QTNF8P60827 252 aa15.04■□□□□ -0
USP40-205ENST00000430158 DYNLL1P63167 89 aaKnown RBP15.04■□□□□ -0
USP40-205ENST00000430158 TTC22Q5TAA0 569 aa15.04■□□□□ -0
USP40-205ENST00000430158 CST9Q5W186 159 aa15.04■□□□□ -0
USP40-205ENST00000430158 FAM83AQ86UY5 434 aa15.04■□□□□ -0
USP40-205ENST00000430158 TICAM2Q86XR7 235 aa15.04■□□□□ -0
USP40-205ENST00000430158 SULF1Q8IWU6 871 aa15.04■□□□□ -0
USP40-205ENST00000430158 CDAN1Q8IWY9 1227 aa15.04■□□□□ -0
USP40-205ENST00000430158 SH3RF3Q8TEJ3 882 aaPredicted RBP15.04■□□□□ -0
USP40-205ENST00000430158 SSC5DA1L4H1 1573 aa15.03■□□□□ -0
USP40-205ENST00000430158 TCP10L2B9ZVM9 353 aa15.03■□□□□ -0
USP40-205ENST00000430158 RASA3Q14644 834 aa15.03■□□□□ -0
USP40-205ENST00000430158 PRAMEF18Q5VWM3 479 aa15.03■□□□□ -0
USP40-205ENST00000430158 ZFPM1Q8IX07 1006 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms