RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 LTBP3Q9NS15 1303 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 ZNF213O14771 459 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 CASTP20810 708 aaKnown RBP15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 MCM2P49736 904 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 DIXDC1Q155Q3 683 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 ADCK5Q3MIX3 580 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 GIMAP6Q6P9H5 292 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 TIAM2Q8IVF5 1701 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 MRIQ9BWK5 157 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 CRNKL1Q9BZJ0 848 aaKnown RBP15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 NAPBQ9H115 298 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 KCNQ5Q9NR82 932 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 CYP46A1Q9Y6A2 500 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 ADAMTSL1Q8N6G6 1762 aa15.13■□□□□ 0.01
HMGB3P4-201ENST00000428776 COL4A5P29400 1685 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 GPR75-ASB3A0A0A6YYF3 556 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 YDJCA8MPS7 323 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 PRKAB2O43741 272 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 HMGB1P09429 215 aaKnown RBP15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 PLCG2P16885 1265 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 RUFY3Q7L099 469 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 UPF3BQ9BZI7 483 aaKnown RBP15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 FHDC1Q9C0D6 1143 aaPredicted RBP15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 EPB41L4AQ9HCS5 686 aaPredicted RBP15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 TTF2Q9UNY4 1162 aaKnown RBP15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 GAKO14976 1311 aa15.12■□□□□ 0.01
HMGB3P4-201ENST00000428776 E7EWF7 191 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 K7ELQ4 463 aaPredicted RBP15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 CD2BP2O95400 341 aaKnown RBP15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 TDO2P48775 406 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 HDLBPQ00341 1268 aaKnown RBP15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 BLOC1S2Q6QNY1 142 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 HHIPL2Q6UWX4 724 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 NIM1KQ8IY84 436 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 NEK1Q96PY6 1258 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 ZNRF3Q9ULT6 936 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 TAF6LQ9Y6J9 622 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 MYO3BQ8WXR4 1341 aa15.11■□□□□ 0.01
HMGB3P4-201ENST00000428776 NFKBIEO00221 500 aa15.1■□□□□ 0.01
HMGB3P4-201ENST00000428776 BTDP43251 543 aa15.1■□□□□ 0.01
HMGB3P4-201ENST00000428776 SDR42E1Q8WUS8 393 aa15.1■□□□□ 0.01
HMGB3P4-201ENST00000428776 JDP2Q8WYK2 163 aa15.1■□□□□ 0.01
HMGB3P4-201ENST00000428776 TTC14Q96N46 770 aa15.1■□□□□ 0.01
HMGB3P4-201ENST00000428776 MXD3Q9BW11 206 aa15.1■□□□□ 0.01
HMGB3P4-201ENST00000428776 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
HMGB3P4-201ENST00000428776 DDX60LQ5H9U9 1706 aaKnown RBP15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 F8W031 263 aaPredicted RBP15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 VIL1P09327 827 aaKnown RBP15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 RPS6KB1P23443 525 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 SLC4A3P48751 1232 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 HAND2P61296 217 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 STOX1Q6ZVD7 989 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 SH3RF3Q8TEJ3 882 aaPredicted RBP15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 TEKT1Q969V4 418 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 PDRG1Q9NUG6 133 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 MYH8P13535 1937 aa15.09■□□□□ 0.01
HMGB3P4-201ENST00000428776 CPA1P15085 419 aa15.08■□□□□ 0
HMGB3P4-201ENST00000428776 SYT17Q9BSW7 474 aa15.08■□□□□ 0
HMGB3P4-201ENST00000428776 DCP1AQ9NPI6 582 aaPredicted RBP15.08■□□□□ 0
HMGB3P4-201ENST00000428776 ANAPC4Q9UJX5 808 aa15.08■□□□□ 0
HMGB3P4-201ENST00000428776 SERPINA10Q9UK55 444 aa15.08■□□□□ 0
HMGB3P4-201ENST00000428776 RAD17O75943 681 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 USP5P45974 858 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 SCNN1DP51172 638 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 TRDNQ13061 729 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 ANKRD1Q15327 319 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 SBK1Q52WX2 424 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 RSBN1LQ6PCB5 846 aaPredicted RBP15.07■□□□□ 0
HMGB3P4-201ENST00000428776 DHX32Q7L7V1 743 aaKnown RBP15.07■□□□□ 0
HMGB3P4-201ENST00000428776 KIAA0825Q8IV33 1275 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 NCOA7Q8NI08 942 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 ZDHHC15Q96MV8 337 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 NBPF3Q9H094 633 aa15.07■□□□□ 0
HMGB3P4-201ENST00000428776 PSMD14O00487 310 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 CRKP46108 304 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 AK2P54819 239 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 RHBDL3P58872 404 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 EXOSC10Q01780 885 aaKnown RBP15.06■□□□□ 0
HMGB3P4-201ENST00000428776 PPARAQ07869 468 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 TNIP1Q15025 636 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 AKNAD1Q5T1N1 836 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 CTR9Q6PD62 1173 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 RALYLQ86SE5 291 aaKnown RBP15.06■□□□□ 0
HMGB3P4-201ENST00000428776 TEX11Q8IYF3 940 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 AGBL3Q8NEM8 1001 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 RNF41Q9H4P4 317 aaPredicted RBP15.06■□□□□ 0
HMGB3P4-201ENST00000428776 CNNM2Q9H8M5 875 aa15.06■□□□□ 0
HMGB3P4-201ENST00000428776 ARPP21Q9UBL0 812 aaPredicted RBP15.06■□□□□ 0
HMGB3P4-201ENST00000428776 MKRN1Q9UHC7 482 aaKnown RBP15.06■□□□□ 0
HMGB3P4-201ENST00000428776 MINDY4BA8MYZ0 360 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 USP17L12C9JPN9 530 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 USP17L21D6R901 530 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 PCP11498 1178 aaKnown RBP15.05■□□□□ -0
HMGB3P4-201ENST00000428776 MCM5P33992 734 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 MMP14P50281 582 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms