RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 DCAF8Q5TAQ9 597 aa10.77□□□□□ -0.69
NR1I3-209ENST00000428574 IFNL3Q8IZI9 196 aa10.77□□□□□ -0.69
NR1I3-209ENST00000428574 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
NR1I3-209ENST00000428574 NAPBQ9H115 298 aa10.77□□□□□ -0.69
NR1I3-209ENST00000428574 RNF41Q9H4P4 317 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-209ENST00000428574 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
NR1I3-209ENST00000428574 LIMCH1Q9UPQ0 1083 aa10.77□□□□□ -0.69
NR1I3-209ENST00000428574 GPR75-ASB3A0A0A6YYF3 556 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 E7EWF7 191 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 TRDNQ13061 729 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 ADCK5Q3MIX3 580 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 SBK1Q52WX2 424 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 DHX32Q7L7V1 743 aaKnown RBP10.76□□□□□ -0.69
NR1I3-209ENST00000428574 LCORLQ8N3X6 602 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 STAG1Q8WVM7 1258 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 ARMT1Q9H993 441 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 SPON1Q9HCB6 807 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
NR1I3-209ENST00000428574 ARPP21Q9UBL0 812 aaPredicted RBP10.76□□□□□ -0.69
NR1I3-209ENST00000428574 SLC4A4Q9Y6R1 1079 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 ROBO3Q96MS0 1386 aa10.76□□□□□ -0.69
NR1I3-209ENST00000428574 MYO5AQ9Y4I1 1855 aaKnown RBP10.75□□□□□ -0.69
NR1I3-209ENST00000428574 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 USP17L3A6NCW0 530 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 USP17L4A6NCW7 530 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 C21orf2O43822 256 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 ECE2O60344 883 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 CD2BP2O95400 341 aaKnown RBP10.75□□□□□ -0.69
NR1I3-209ENST00000428574 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
NR1I3-209ENST00000428574 DDIT3P35638 169 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 EVCP57679 992 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 SLFNL1Q499Z3 407 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 TTLL5Q6EMB2 1281 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 USP17L1Q7RTZ2 530 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
NR1I3-209ENST00000428574 ADGRA1Q86SQ6 560 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 NCOA7Q8NI08 942 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 TMX3Q96JJ7 454 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 UPF3BQ9BZI7 483 aaKnown RBP10.75□□□□□ -0.69
NR1I3-209ENST00000428574 KRT23Q9C075 422 aa10.75□□□□□ -0.69
NR1I3-209ENST00000428574 EPB41L4AQ9HCS5 686 aaPredicted RBP10.75□□□□□ -0.69
NR1I3-209ENST00000428574 APPP05067 770 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 FGRP09769 529 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 MCM5P33992 734 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 TDO2P48775 406 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 RCAN1P53805 252 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 AK2P54819 239 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 GTF2IP78347 998 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 EXOSC10Q01780 885 aaKnown RBP10.74□□□□□ -0.69
NR1I3-209ENST00000428574 SLC51AQ86UW1 340 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 AMOTL1Q8IY63 956 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 MIGA1Q8NAN2 632 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 GPR101Q96P66 508 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-209ENST00000428574 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
NR1I3-209ENST00000428574 PSME4Q14997 1843 aa10.74□□□□□ -0.69
NR1I3-209ENST00000428574 ZNF646O15015 1829 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-209ENST00000428574 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 PPIP5K2O43314 1243 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
NR1I3-209ENST00000428574 DACT2Q5SW24 774 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 AKNAD1Q5T1N1 836 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 STOX1Q6ZVD7 989 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 MB21D2Q8IYB1 491 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-209ENST00000428574 TMEM87BQ96K49 555 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 ZNF287Q9HBT7 754 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 SERPINA10Q9UK55 444 aa10.73□□□□□ -0.69
NR1I3-209ENST00000428574 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-209ENST00000428574 COL2A1P02458 1487 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-209ENST00000428574 ARFGEF1Q9Y6D6 1849 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 ORC4O43929 436 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 PPARAQ07869 468 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 AOC3Q16853 763 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 OLFM4Q6UX06 510 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 TMTC2Q8N394 836 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 TEKT1Q969V4 418 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 ZNF274Q96GC6 653 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-209ENST00000428574 ZDHHC15Q96MV8 337 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 NBPF3Q9H094 633 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 DCP1AQ9NPI6 582 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-209ENST00000428574 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
NR1I3-209ENST00000428574 LAMB1P07942 1786 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
NR1I3-209ENST00000428574 VIL1P09327 827 aaKnown RBP10.71□□□□□ -0.69
NR1I3-209ENST00000428574 IARSP41252 1262 aaKnown RBP10.71□□□□□ -0.69
NR1I3-209ENST00000428574 LIFRP42702 1097 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 BTDP43251 543 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 RHBDL3P58872 404 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 NUCB2P80303 420 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 TOB2Q14106 344 aaPredicted RBP10.71□□□□□ -0.69
NR1I3-209ENST00000428574 NID2Q14112 1375 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.69
NR1I3-209ENST00000428574 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 CCDC178Q5BJE1 867 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 MFSD6Q6ZSS7 791 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 TBC1D10CQ8IV04 446 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 NIM1KQ8IY84 436 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms