RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SCAND2PQ9GZW5 306 aaPredicted RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 NSRP1Q9H0G5 558 aaKnown RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 KIAA1107Q9UPP5 1409 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 POLA1P09884 1462 aaPredicted RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 PPFIA3O75145 1194 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 TCF3P15923 654 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 KRT2P35908 639 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 HAND2P61296 217 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 RRAGBQ5VZM2 374 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 NLRX1Q86UT6 975 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 GIPC2Q8TF65 315 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 ATRIPQ8WXE1 791 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 GLT8D2Q9H1C3 349 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 MBIPQ9NS73 344 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 HMG20BQ9P0W2 317 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 FAM8A1Q9UBU6 413 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 NUB1Q9Y5A7 615 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 DYNC1I1O14576 645 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 ASIC1P78348 528 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 ZYXQ15942 572 aaKnown RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 CAMK4Q16566 473 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 STIM2Q9P246 746 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 SLC8A2Q9UPR5 921 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 YARSP54577 528 aaKnown RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 YWHAEP62258 255 aaKnown RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 LIN9Q5TKA1 542 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 SMC6Q96SB8 1091 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 C19orf44Q9H6X5 657 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 MLXIPQ9HAP2 919 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 ITM2BQ9Y287 266 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 TROQ12816 1431 aaPredicted RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 PLB1Q6P1J6 1458 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 PFDN6O15212 129 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 TTLL7Q6ZT98 887 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 CEP128Q6ZU80 1094 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 PARD3BQ8TEW8 1205 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 CSRNP2Q9H175 543 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 GOLGA8CPA6NN73 597 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 EPB41P11171 864 aaKnown RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 RPL13P26373 211 aaKnown RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 KRT9P35527 623 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 PARP10Q53GL7 1025 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 GANCQ8TET4 914 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 RAB3IPQ96QF0 476 aaPredicted RBP6.43□□□□□ -1.38
HERC4-206ENST00000427635 USP25Q9UHP3 1055 aa6.43□□□□□ -1.38
HERC4-206ENST00000427635 EFCAB5A4FU69 1503 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 ABCC11Q96J66 1382 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 PDE6AP16499 860 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 HOXD10P28358 340 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 DPP9Q86TI2 863 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 GPIHBP1Q8IV16 184 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 MAGEB6Q8N7X4 407 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 FSIP1Q8NA03 581 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 ATL2Q8NHH9 583 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 CTAGE1Q96RT6 745 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 TRPC6Q9Y210 931 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 IGF1RP08069 1367 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 BICDL2A1A5D9 508 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 UNCXA6NJT0 531 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 KRT10P13645 584 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 ALDH1L2Q3SY69 923 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 NAALADL2Q58DX5 795 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 AKAP4Q5JQC9 854 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 PPP1R21Q6ZMI0 780 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 ELMOD1Q8N336 334 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 RPS6KC1Q96S38 1066 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.42□□□□□ -1.38
HERC4-206ENST00000427635 SEMA3EO15041 775 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 MAP3K7O43318 606 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 GNPTABQ3T906 1256 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 METTL13Q8N6R0 699 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 FBF1Q8TES7 1133 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 PSPC1Q8WXF1 523 aaKnown RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 ANKFY1Q9P2R3 1169 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 SH3BP1Q9Y3L3 701 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 ATP6V0A2Q9Y487 856 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 POLR3GO15318 223 aaPredicted RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 CALUO43852 315 aaPredicted RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 HSF2BPO75031 334 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 ERCC5P28715 1186 aaPredicted RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 OTUD6AQ7L8S5 288 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 NCAPG2Q86XI2 1143 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 MCF2L2Q86YR7 1114 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 C2CD5Q86YS7 1000 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 VPS52Q8N1B4 723 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 SLC17A8Q8NDX2 589 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 NEK1Q96PY6 1258 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 NAP1L3Q99457 506 aaPredicted RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 ACEP12821 1306 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 KRT19P08727 400 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 CYLC1P35663 651 aaPredicted RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 IL15P40933 162 aaPredicted RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 FBXO31Q5XUX0 539 aaPredicted RBP6.42□□□□□ -1.38
HERC4-206ENST00000427635 RAB11FIP4Q86YS3 637 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 JADE2Q9NQC1 790 aa6.42□□□□□ -1.38
HERC4-206ENST00000427635 WDR46O15213 610 aaKnown RBP6.41□□□□□ -1.38
HERC4-206ENST00000427635 ITIH3Q06033 890 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 ARHGEF16Q5VV41 709 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 CCDC102BQ68D86 513 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms