RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
SYNC-204ENST00000426909 DLGAP5Q15398 846 aa13.13□□□□□ -0.31
SYNC-204ENST00000426909 ANGEL2Q5VTE6 544 aaKnown RBP13.13□□□□□ -0.31
SYNC-204ENST00000426909 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
SYNC-204ENST00000426909 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
SYNC-204ENST00000426909 HMG20BQ9P0W2 317 aa13.13□□□□□ -0.31
SYNC-204ENST00000426909 SNX14Q9Y5W7 946 aa13.13□□□□□ -0.31
SYNC-204ENST00000426909 WNT10BO00744 389 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 SEMA3EO15041 775 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 MYO1BO43795 1136 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 TIMM10P62072 90 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 MTMR14Q8NCE2 650 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 TMX3Q96JJ7 454 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 NEUROD6Q96NK8 337 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 ABT1Q9ULW3 272 aaKnown RBP13.12□□□□□ -0.31
SYNC-204ENST00000426909 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
SYNC-204ENST00000426909 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
SYNC-204ENST00000426909 CELF2O95319 508 aaKnown RBP13.11□□□□□ -0.31
SYNC-204ENST00000426909 PSMA5P28066 241 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
SYNC-204ENST00000426909 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNC-204ENST00000426909 KRT32Q14532 448 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 TSGA10IPQ3SY00 556 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 HELLSQ9NRZ9 838 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 PAG1Q9NWQ8 432 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 SUGT1Q9Y2Z0 365 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 MAST3O60307 1309 aa13.11□□□□□ -0.31
SYNC-204ENST00000426909 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
SYNC-204ENST00000426909 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 ADM5C9JUS6 153 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 GOLGA6L22H0YM25 854 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 ZBTB22O15209 634 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 ADORA1P30542 326 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 PHKA1P46020 1223 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 PTH1RQ03431 593 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 FMR1Q06787 632 aaKnown RBP eCLIP13.1□□□□□ -0.31
SYNC-204ENST00000426909 GSE1Q14687 1217 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 CFAP100Q494V2 611 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 CST9Q5W186 159 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 APOBEC3FQ8IUX4 373 aaKnown RBP13.1□□□□□ -0.31
SYNC-204ENST00000426909 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
SYNC-204ENST00000426909 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
SYNC-204ENST00000426909 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 ZSWIM6Q9HCJ5 1215 aa13.1□□□□□ -0.31
SYNC-204ENST00000426909 RBM8AQ9Y5S9 174 aaKnown RBP13.1□□□□□ -0.31
SYNC-204ENST00000426909 CNTNAP1P78357 1384 aa13.09□□□□□ -0.31
SYNC-204ENST00000426909 CYP2E1P05181 493 aaPredicted RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 ZFYP08048 801 aaPredicted RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 SKOR2Q2VWA4 1001 aaPredicted RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 CREB3L3Q68CJ9 461 aa13.09□□□□□ -0.31
SYNC-204ENST00000426909 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 ZBED3Q96IU2 234 aaPredicted RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 ZSCAN31Q96LW9 406 aaPredicted RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 TTC14Q96N46 770 aa13.09□□□□□ -0.31
SYNC-204ENST00000426909 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 CYP46A1Q9Y6A2 500 aa13.09□□□□□ -0.31
SYNC-204ENST00000426909 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
SYNC-204ENST00000426909 RPAP1Q9BWH6 1393 aaPredicted RBP13.08□□□□□ -0.31
SYNC-204ENST00000426909 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 CRKP46108 304 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 TTC39AQ5SRH9 613 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 TEKT1Q969V4 418 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 CDCA5Q96FF9 252 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 UPF3BQ9BZI7 483 aaKnown RBP13.08□□□□□ -0.32
SYNC-204ENST00000426909 SH2B1Q9NRF2 756 aaPredicted RBP13.08□□□□□ -0.32
SYNC-204ENST00000426909 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.32
SYNC-204ENST00000426909 SALL1Q9NSC2 1324 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 TRPM7Q96QT4 1865 aa13.08□□□□□ -0.32
SYNC-204ENST00000426909 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 SLC27A2O14975 620 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 PDIA4P13667 645 aaKnown RBP13.07□□□□□ -0.32
SYNC-204ENST00000426909 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 RUFY3Q7L099 469 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 SAPCD2Q86UD0 394 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 C2orf69Q8N8R5 385 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms