RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ZNF75DP51815 510 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 NFIXQ14938 502 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 KRT85P78386 507 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 DZIP1Q86YF9 867 aaKnown RBP18.41■□□□□ 0.54
PKP4-205ENST00000426248 MAGEB6Q8N7X4 407 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 TULP2O00295 520 aa18.4■□□□□ 0.54
PKP4-205ENST00000426248 F13A1P00488 732 aa18.4■□□□□ 0.54
PKP4-205ENST00000426248 CLCN6P51797 869 aa18.4■□□□□ 0.54
PKP4-205ENST00000426248 PTH1RQ03431 593 aa18.4■□□□□ 0.54
PKP4-205ENST00000426248 MARF1Q9Y4F3 1742 aaKnown RBP18.4■□□□□ 0.54
PKP4-205ENST00000426248 IMMTQ16891 758 aaKnown RBP18.4■□□□□ 0.54
PKP4-205ENST00000426248 NACAP1Q9BZK3 213 aa18.4■□□□□ 0.54
PKP4-205ENST00000426248 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
PKP4-205ENST00000426248 NAPBQ9H115 298 aa18.4■□□□□ 0.54
PKP4-205ENST00000426248 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
PKP4-205ENST00000426248 SLIT2O94813 1529 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 CPLX1O14810 134 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 CYP7A1P22680 504 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 BAG6P46379 1132 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 CASP7P55210 303 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 SMARCE1Q969G3 411 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 HAUS7Q99871 368 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 JRKLQ9Y4A0 524 aa18.39■□□□□ 0.54
PKP4-205ENST00000426248 PNMA6AP0CW24 399 aaPredicted RBP18.39■□□□□ 0.53
PKP4-205ENST00000426248 DNAI1Q9UI46 699 aa18.39■□□□□ 0.53
PKP4-205ENST00000426248 RRP15Q9Y3B9 282 aaKnown RBP18.39■□□□□ 0.53
PKP4-205ENST00000426248 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.39■□□□□ 0.53
PKP4-205ENST00000426248 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.53
PKP4-205ENST00000426248 ABCC6O95255 1503 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 CHGBP05060 677 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 INTS4Q96HW7 963 aaKnown RBP18.38■□□□□ 0.53
PKP4-205ENST00000426248 DISP2A7MBM2 1401 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 RC3H1Q5TC82 1133 aaKnown RBP18.38■□□□□ 0.53
PKP4-205ENST00000426248 LARP1BQ659C4 914 aaKnown RBP18.38■□□□□ 0.53
PKP4-205ENST00000426248 ZSWIM4Q9H7M6 989 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 ZNF213O14771 459 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 UFL1O94874 794 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 CREB3L3Q68CJ9 461 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 CHST3Q7LGC8 479 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 SPATA32Q96LK8 384 aa18.38■□□□□ 0.53
PKP4-205ENST00000426248 F8W031 263 aaPredicted RBP18.37■□□□□ 0.53
PKP4-205ENST00000426248 H3BQV1 296 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 GJB2P29033 226 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 CNPY4Q8N129 248 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 ZFYP08048 801 aaPredicted RBP18.37■□□□□ 0.53
PKP4-205ENST00000426248 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 NTSR2O95665 410 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 KRT32Q14532 448 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 NLGN1Q8N2Q7 840 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 LCMT1Q9UIC8 334 aa18.37■□□□□ 0.53
PKP4-205ENST00000426248 MMP10P09238 476 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 RBM5P52756 815 aaKnown RBP eCLIP18.36■□□□□ 0.53
PKP4-205ENST00000426248 AMOTL1Q8IY63 956 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 ANKRD2Q9GZV1 360 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 CSF1RP07333 972 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 HIBADHP31937 336 aaKnown RBP18.36■□□□□ 0.53
PKP4-205ENST00000426248 MNAT1P51948 309 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
PKP4-205ENST00000426248 NHSL1Q5SYE7 1610 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 CNTNAP4Q9C0A0 1308 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 MCM6Q14566 821 aa18.36■□□□□ 0.53
PKP4-205ENST00000426248 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
PKP4-205ENST00000426248 RAB11FIP4Q86YS3 637 aa18.35■□□□□ 0.53
PKP4-205ENST00000426248 RAD21O60216 631 aa18.35■□□□□ 0.53
PKP4-205ENST00000426248 GPR108Q9NPR9 543 aa18.35■□□□□ 0.53
PKP4-205ENST00000426248 NEK1Q96PY6 1258 aa18.35■□□□□ 0.53
PKP4-205ENST00000426248 VPS18Q9P253 973 aa18.35■□□□□ 0.53
PKP4-205ENST00000426248 RIPOR2Q9Y4F9 1068 aa18.35■□□□□ 0.53
PKP4-205ENST00000426248 RAD50Q92878 1312 aa18.35■□□□□ 0.53
PKP4-205ENST00000426248 ERICH2A1L162 156 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 PHACTR2O75167 634 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 PRR29P0C7W0 189 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 SCARF1Q14162 830 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 CCDC144BQ3MJ40 725 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 HSP90B2PQ58FF3 399 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 NECAB1Q8N987 351 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 GPR101Q96P66 508 aaPredicted RBP18.34■□□□□ 0.53
PKP4-205ENST00000426248 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
PKP4-205ENST00000426248 LIG1P18858 919 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 FAM193AP78312 1265 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 NAA16Q6N069 864 aaPredicted RBP18.34■□□□□ 0.53
PKP4-205ENST00000426248 COL18A1P39060 1754 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
PKP4-205ENST00000426248 SMC1AQ14683 1233 aaKnown RBP18.34■□□□□ 0.53
PKP4-205ENST00000426248 CCDC102AQ96A19 550 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 GEMIN8Q9NWZ8 242 aaKnown RBP18.34■□□□□ 0.53
PKP4-205ENST00000426248 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
PKP4-205ENST00000426248 KIF2AO00139 706 aaPredicted RBP18.33■□□□□ 0.53
PKP4-205ENST00000426248 PLA2G12BQ9BX93 195 aa18.33■□□□□ 0.53
PKP4-205ENST00000426248 MRVI1Q9Y6F6 885 aa18.33■□□□□ 0.53
PKP4-205ENST00000426248 MRC1P22897 1456 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms