RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CLIC6Q96NY7 704 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 CARD10Q9BWT7 1032 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 PLA2G12BQ9BX93 195 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 ZMYM6O95789 1325 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 HSPA2P54652 639 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 EVA1CP58658 441 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 NLRP12P59046 1061 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 ZNF215Q9UL58 517 aaPredicted RBP18.31■□□□□ 0.52
CDH1-202ENST00000422392 SH2B2O14492 632 aaPredicted RBP18.3■□□□□ 0.52
CDH1-202ENST00000422392 CMA1P23946 247 aa18.3■□□□□ 0.52
CDH1-202ENST00000422392 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
CDH1-202ENST00000422392 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
CDH1-202ENST00000422392 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
CDH1-202ENST00000422392 MAP3K15Q6ZN16 1313 aa18.3■□□□□ 0.52
CDH1-202ENST00000422392 PNOCQ13519 176 aa18.3■□□□□ 0.52
CDH1-202ENST00000422392 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
CDH1-202ENST00000422392 SLC39A14Q15043 492 aa18.3■□□□□ 0.52
CDH1-202ENST00000422392 IRS4O14654 1257 aaPredicted RBP18.29■□□□□ 0.52
CDH1-202ENST00000422392 SYKP43405 635 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 CTSWP56202 376 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 E4F1Q66K89 784 aaPredicted RBP18.29■□□□□ 0.52
CDH1-202ENST00000422392 SHC4Q6S5L8 630 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 VGLL2Q8N8G2 317 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
CDH1-202ENST00000422392 ANKRD18BA2A2Z9 1011 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 PDE6AP16499 860 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 CCDC102BQ68D86 513 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 NFXL1Q6ZNB6 911 aa18.29■□□□□ 0.52
CDH1-202ENST00000422392 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.28■□□□□ 0.52
CDH1-202ENST00000422392 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
CDH1-202ENST00000422392 RANBP6O60518 1105 aaKnown RBP18.28■□□□□ 0.52
CDH1-202ENST00000422392 IGSF3O75054 1194 aa18.28■□□□□ 0.52
CDH1-202ENST00000422392 CTDSPL2Q05D32 466 aa18.28■□□□□ 0.52
CDH1-202ENST00000422392 SPECC1Q5M775 1068 aa18.28■□□□□ 0.52
CDH1-202ENST00000422392 BPIFA3Q9BQP9 254 aa18.28■□□□□ 0.52
CDH1-202ENST00000422392 HSD3B7Q9H2F3 369 aa18.28■□□□□ 0.52
CDH1-202ENST00000422392 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
CDH1-202ENST00000422392 ZHX1Q9UKY1 873 aaPredicted RBP18.28■□□□□ 0.52
CDH1-202ENST00000422392 CHD4Q14839 1912 aa18.28■□□□□ 0.52
CDH1-202ENST00000422392 GSDMDP57764 484 aa18.28■□□□□ 0.52
CDH1-202ENST00000422392 NPHP1O15259 732 aa18.27■□□□□ 0.52
CDH1-202ENST00000422392 PDE8BO95263 885 aa18.27■□□□□ 0.52
CDH1-202ENST00000422392 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
CDH1-202ENST00000422392 ABCC12Q96J65 1359 aa18.27■□□□□ 0.52
CDH1-202ENST00000422392 STARD3NLO95772 234 aa18.27■□□□□ 0.51
CDH1-202ENST00000422392 PTPAQ15257 358 aa18.27■□□□□ 0.51
CDH1-202ENST00000422392 NTRK3Q16288 839 aa18.27■□□□□ 0.51
CDH1-202ENST00000422392 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.51
CDH1-202ENST00000422392 DPF2Q92785 391 aa18.27■□□□□ 0.51
CDH1-202ENST00000422392 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.51
CDH1-202ENST00000422392 TACC3Q9Y6A5 838 aa18.27■□□□□ 0.51
CDH1-202ENST00000422392 WDR19Q8NEZ3 1342 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 ITGB4P16144 1822 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 NUP98P52948 1817 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 ZBTB43O43298 467 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 SFPQP23246 707 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDH1-202ENST00000422392 FANCCQ00597 558 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 SYCP1Q15431 976 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 AIDAQ96BJ3 306 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 MAP3K14Q99558 947 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 FAM217BQ9NTX9 383 aaPredicted RBP18.26■□□□□ 0.51
CDH1-202ENST00000422392 ZBTB1Q9Y2K1 713 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 UBN2Q6ZU65 1347 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 GOLGA8AA7E2F4 631 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 DMTNQ08495 405 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 HSP90AA4PQ58FG1 418 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 SLC26A6Q9BXS9 759 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 EPB41L4AQ9HCS5 686 aaPredicted RBP18.26■□□□□ 0.51
CDH1-202ENST00000422392 IMPACTQ9P2X3 320 aa18.26■□□□□ 0.51
CDH1-202ENST00000422392 CDHR2Q9BYE9 1310 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 FOXN1O15353 648 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 IARSP41252 1262 aaKnown RBP18.25■□□□□ 0.51
CDH1-202ENST00000422392 TTF1Q15361 905 aaPredicted RBP18.25■□□□□ 0.51
CDH1-202ENST00000422392 UBE3CQ15386 1083 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 TMEM67Q5HYA8 995 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 PPP1R13BQ96KQ4 1090 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 STRBPQ96SI9 672 aaKnown RBP18.25■□□□□ 0.51
CDH1-202ENST00000422392 GUCY1A2P33402 732 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 CMTR1Q8N1G2 835 aaKnown RBP18.25■□□□□ 0.51
CDH1-202ENST00000422392 KIF18AQ8NI77 898 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 ZSWIM5Q9P217 1185 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 HPSEQ9Y251 543 aa18.25■□□□□ 0.51
CDH1-202ENST00000422392 ELF2Q15723 593 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 LONRF3Q496Y0 759 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
CDH1-202ENST00000422392 SYT10Q6XYQ8 523 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 METTL16Q86W50 562 aaKnown RBP18.24■□□□□ 0.51
CDH1-202ENST00000422392 MAGEB6Q8N7X4 407 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 ARMT1Q9H993 441 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 ATRNO75882 1429 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 CDKL5O76039 1030 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 MBD4O95243 580 aa18.24■□□□□ 0.51
CDH1-202ENST00000422392 TPM4P67936 248 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms