RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CDV3Q9UKY7 258 aaKnown RBP7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 SPG7Q9UQ90 795 aa7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 SOS1Q07889 1333 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 COL15A1P39059 1388 aa7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 MRC1P22897 1456 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 ATP2B4P23634 1241 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 VARSP26640 1264 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 WNT7BP56706 349 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 USP4Q13107 963 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 SLC4A8Q2Y0W8 1093 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 CCDC102BQ68D86 513 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 PRR5LQ6MZQ0 368 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 NR2E3Q9Y5X4 410 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 COL4A5P29400 1685 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 TJP1Q07157 1748 aa7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 EDC4Q6P2E9 1401 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-206ENST00000417628 SFI1A8K8P3 1242 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 SCNN1AP37088 669 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 RAB15P59190 212 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 INTS6LQ5JSJ4 861 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 PPP1R18Q6NYC8 613 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 INTS5Q6P9B9 1019 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 USP48Q86UV5 1035 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 TPCN2Q8NHX9 752 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 ZNF333Q96JL9 665 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 HTATIP2Q9BUP3 242 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 CFHR5Q9BXR6 569 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 PTPN22Q9Y2R2 807 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 ZNF609O15014 1411 aa7.43□□□□□ -1.22
ECHDC1-206ENST00000417628 ANKRD26Q9UPS8 1709 aa7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 ARID4AP29374 1257 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 SCTRP47872 440 aa7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 RPIAP49247 311 aa7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 SEC13P55735 322 aa7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 PSMD1Q99460 953 aa7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 HCN4Q9Y3Q4 1203 aa7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 CDHR2Q9BYE9 1310 aa7.42□□□□□ -1.22
ECHDC1-206ENST00000417628 SPTBN5Q9NRC6 3674 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 ERVH48-1M5A8F1 160 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 NPHP1O15259 732 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 PTCD1O75127 700 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 PHKG2P15735 406 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 GGCXP38435 758 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 ST5P78524 1137 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 OCLNQ16625 522 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 FOXD4L5Q5VV16 416 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 OLFM4Q6UX06 510 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 DLK2Q6UY11 383 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 VASH1Q7L8A9 365 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 IFNL2Q8IZJ0 200 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 CNBD1Q8NA66 436 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 CCER1Q8TC90 406 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 FOXD4L4Q8WXT5 416 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 EMID1Q96A84 441 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 A0A1W2PP64 1363 aa7.41□□□□□ -1.22
ECHDC1-206ENST00000417628 PRMT3O60678 531 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 HIRAP54198 1017 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 LRIT3Q3SXY7 679 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 LIAT1Q6ZQX7 453 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 KRT26Q7Z3Y9 468 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 ALYREFQ86V81 257 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 NIM1KQ8IY84 436 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 TRPM4Q8TD43 1214 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 PRIMPOLQ96LW4 560 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 CDK15Q96Q40 435 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 WASHC2AQ641Q2 1341 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 TONSLQ96HA7 1378 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 SNED1Q8TER0 1413 aa7.4□□□□□ -1.22
ECHDC1-206ENST00000417628 WTIPA6NIX2 430 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 ERVV-2B6SEH9 535 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 LGR5O75473 907 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 NPR1P16066 1061 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 GRM5P41594 1212 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 TM4SF4P48230 202 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 GMPSP49915 693 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 SREBF2Q12772 1141 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 CCDC27Q2M243 656 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 SLC9C1Q4G0N8 1177 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 TBC1D9BQ66K14 1250 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 TAS1R3Q7RTX0 852 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 EHBP1Q8NDI1 1231 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 ERO1AQ96HE7 468 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 GUCD1Q96NT3 240 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 P2RX7Q99572 595 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 R3HDMLQ9H3Y0 253 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 STAP2Q9UGK3 403 aa7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 RANBP2P49792 3224 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-206ENST00000417628 CEP290O15078 2479 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 NCAPD2Q15021 1401 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 NPC1L1Q9UHC9 1359 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 HTTP42858 3142 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 IRS2Q9Y4H2 1338 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 ADM5C9JUS6 153 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 SIAH2O43255 324 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms