RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 PI4KAP1Q8N8J0 262 aa11.22□□□□□ -0.61
SMIM12-201ENST00000417239 DIS3LQ8TF46 1054 aaKnown RBP11.22□□□□□ -0.61
SMIM12-201ENST00000417239 PRDM6Q9NQX0 595 aa11.22□□□□□ -0.61
SMIM12-201ENST00000417239 ZMYND8Q9ULU4 1186 aaPredicted RBP11.22□□□□□ -0.61
SMIM12-201ENST00000417239 DOCK1Q14185 1865 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.61
SMIM12-201ENST00000417239 MAGEA10P43363 369 aaPredicted RBP11.21□□□□□ -0.61
SMIM12-201ENST00000417239 CRKP46108 304 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 CACNB3P54284 484 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 CASP7P55210 303 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 NECAB2Q7Z6G3 386 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 PXYLP1Q8TE99 480 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 RUNDC1Q96C34 613 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 KCNH4Q9UQ05 1017 aa11.21□□□□□ -0.61
SMIM12-201ENST00000417239 FLT3LGP49771 235 aa11.2□□□□□ -0.62
SMIM12-201ENST00000417239 C8orf58Q8NAV2 365 aa11.2□□□□□ -0.62
SMIM12-201ENST00000417239 TDRD7Q8NHU6 1098 aaKnown RBP11.2□□□□□ -0.62
SMIM12-201ENST00000417239 GUCD1Q96NT3 240 aa11.2□□□□□ -0.62
SMIM12-201ENST00000417239 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
SMIM12-201ENST00000417239 LOC285556D6RIA3 1793 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 CYP2C8P10632 490 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 SYN1P17600 705 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 INPP5BP32019 993 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 IRF5Q13568 498 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 GCKRQ14397 625 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 GRIK5Q16478 980 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 CCDC30Q5VVM6 783 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 FAM83AQ86UY5 434 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 PARK7Q99497 189 aaKnown RBP11.19□□□□□ -0.62
SMIM12-201ENST00000417239 IFT57Q9NWB7 429 aa11.19□□□□□ -0.62
SMIM12-201ENST00000417239 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
SMIM12-201ENST00000417239 GPAT2Q6NUI2 795 aa11.18□□□□□ -0.62
SMIM12-201ENST00000417239 HOOK2Q96ED9 719 aa11.18□□□□□ -0.62
SMIM12-201ENST00000417239 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMIM12-201ENST00000417239 ATAD5Q96QE3 1844 aa11.17□□□□□ -0.62
SMIM12-201ENST00000417239 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
SMIM12-201ENST00000417239 GYG1P46976 350 aa11.17□□□□□ -0.62
SMIM12-201ENST00000417239 HDLBPQ00341 1268 aaKnown RBP11.17□□□□□ -0.62
SMIM12-201ENST00000417239 FKBP1CQ5VVH2 108 aa11.17□□□□□ -0.62
SMIM12-201ENST00000417239 FAM109BQ6ICB4 259 aaPredicted RBP11.17□□□□□ -0.62
SMIM12-201ENST00000417239 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
SMIM12-201ENST00000417239 UBE2OQ9C0C9 1292 aaKnown RBP11.17□□□□□ -0.62
SMIM12-201ENST00000417239 ZNF112Q9UJU3 913 aa11.17□□□□□ -0.62
SMIM12-201ENST00000417239 GNAI1P63096 354 aa11.16□□□□□ -0.62
SMIM12-201ENST00000417239 FOXO4P98177 505 aa11.16□□□□□ -0.62
SMIM12-201ENST00000417239 IFIT5Q13325 482 aaKnown RBP11.16□□□□□ -0.62
SMIM12-201ENST00000417239 MIGA2Q7L4E1 593 aa11.16□□□□□ -0.62
SMIM12-201ENST00000417239 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
SMIM12-201ENST00000417239 FAM84BQ96KN1 310 aaPredicted RBP11.16□□□□□ -0.62
SMIM12-201ENST00000417239 ZDHHC15Q96MV8 337 aa11.16□□□□□ -0.62
SMIM12-201ENST00000417239 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
SMIM12-201ENST00000417239 TNPO2O14787 897 aaKnown RBP11.15□□□□□ -0.62
SMIM12-201ENST00000417239 PLIN1O60240 522 aa11.15□□□□□ -0.62
SMIM12-201ENST00000417239 HIBADHP31937 336 aaKnown RBP11.15□□□□□ -0.62
SMIM12-201ENST00000417239 NOL9Q5SY16 702 aaKnown RBP11.15□□□□□ -0.62
SMIM12-201ENST00000417239 G2E3Q7L622 706 aa11.15□□□□□ -0.62
SMIM12-201ENST00000417239 TSPYL6Q8N831 410 aa11.15□□□□□ -0.62
SMIM12-201ENST00000417239 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
SMIM12-201ENST00000417239 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.62
SMIM12-201ENST00000417239 TTC28Q96AY4 2481 aa11.15□□□□□ -0.62
SMIM12-201ENST00000417239 PFASO15067 1338 aa11.14□□□□□ -0.63
SMIM12-201ENST00000417239 CXCL11O14625 94 aa11.14□□□□□ -0.63
SMIM12-201ENST00000417239 APOBEC3HQ6NTF7 200 aaKnown RBP11.14□□□□□ -0.63
SMIM12-201ENST00000417239 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
SMIM12-201ENST00000417239 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
SMIM12-201ENST00000417239 FAM161BQ96MY7 647 aa11.14□□□□□ -0.63
SMIM12-201ENST00000417239 C11orf49Q9H6J7 331 aa11.14□□□□□ -0.63
SMIM12-201ENST00000417239 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
SMIM12-201ENST00000417239 A0A0G2JLL6 359 aaPredicted RBP11.13□□□□□ -0.63
SMIM12-201ENST00000417239 UBE4AQ14139 1066 aa11.13□□□□□ -0.63
SMIM12-201ENST00000417239 PRRT2Q7Z6L0 340 aaPredicted RBP11.13□□□□□ -0.63
SMIM12-201ENST00000417239 LINS1Q8NG48 757 aa11.13□□□□□ -0.63
SMIM12-201ENST00000417239 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
SMIM12-201ENST00000417239 SLC45A1Q9Y2W3 748 aa11.13□□□□□ -0.63
SMIM12-201ENST00000417239 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
SMIM12-201ENST00000417239 ATRNL1Q5VV63 1379 aa11.13□□□□□ -0.63
SMIM12-201ENST00000417239 MYH2Q9UKX2 1941 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 HMGCRP04035 888 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 COL9A1P20849 921 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
SMIM12-201ENST00000417239 RALBP1Q15311 655 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 FASTKD5Q7L8L6 764 aaKnown RBP11.12□□□□□ -0.63
SMIM12-201ENST00000417239 TBC1D22AQ8WUA7 517 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 FAM151AQ8WW52 585 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 MRIQ9BWK5 157 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 STK31Q9BXU1 1019 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 CNNM1Q9NRU3 951 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 OGDHLQ9ULD0 1010 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
SMIM12-201ENST00000417239 IQSEC3Q9UPP2 1182 aaPredicted RBP11.12□□□□□ -0.63
SMIM12-201ENST00000417239 TRIM32Q13049 653 aa11.11□□□□□ -0.63
SMIM12-201ENST00000417239 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
SMIM12-201ENST00000417239 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMIM12-201ENST00000417239 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
SMIM12-201ENST00000417239 EPHA10Q5JZY3 1008 aa11.11□□□□□ -0.63
SMIM12-201ENST00000417239 LMBR1LQ6UX01 489 aa11.11□□□□□ -0.63
SMIM12-201ENST00000417239 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms