RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 USP17L4A6NCW7 530 aa13.43□□□□□ -0.26
LINC00330-201ENST00000414562 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
LINC00330-201ENST00000414562 FOXP2O15409 715 aa13.43□□□□□ -0.26
LINC00330-201ENST00000414562 STRIP1Q5VSL9 837 aa13.43□□□□□ -0.26
LINC00330-201ENST00000414562 USP17L1Q7RTZ2 530 aa13.43□□□□□ -0.26
LINC00330-201ENST00000414562 NIM1KQ8IY84 436 aa13.43□□□□□ -0.26
LINC00330-201ENST00000414562 WDR66Q8TBY9 1149 aa13.43□□□□□ -0.26
LINC00330-201ENST00000414562 APPBP2Q92624 585 aa13.43□□□□□ -0.26
LINC00330-201ENST00000414562 G3V3G9 751 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 VIL1P09327 827 aaKnown RBP13.42□□□□□ -0.26
LINC00330-201ENST00000414562 CPA1P15085 419 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 LMNB1P20700 586 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 KRT32Q14532 448 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 ADCK5Q3MIX3 580 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 DSCC1Q9BVC3 393 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 LRP2BPQ9P2M1 347 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 KIAA0825Q8IV33 1275 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
LINC00330-201ENST00000414562 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 HSPD1P10809 573 aaKnown RBP13.41□□□□□ -0.26
LINC00330-201ENST00000414562 DDIT3P35638 169 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 SCNN1DP51172 638 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 DYNLL1P63167 89 aaKnown RBP13.41□□□□□ -0.26
LINC00330-201ENST00000414562 MAP3K12Q12852 859 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 TTC14Q96N46 770 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
LINC00330-201ENST00000414562 RNF181Q9P0P0 153 aa13.41□□□□□ -0.26
LINC00330-201ENST00000414562 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
LINC00330-201ENST00000414562 AK2P54819 239 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 MIGA1Q8NAN2 632 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 EGFRP00533 1210 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 CYP7A1P22680 504 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 UBE3CQ15386 1083 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 TSGA10IPQ3SY00 556 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 RSBN1LQ6PCB5 846 aaPredicted RBP13.4□□□□□ -0.26
LINC00330-201ENST00000414562 JDP2Q8WYK2 163 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 LIMCH1Q9UPQ0 1083 aa13.4□□□□□ -0.26
LINC00330-201ENST00000414562 RPAP1Q9BWH6 1393 aaPredicted RBP13.39□□□□□ -0.27
LINC00330-201ENST00000414562 PRKAB2O43741 272 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
LINC00330-201ENST00000414562 CTNNA3Q9UI47 895 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
LINC00330-201ENST00000414562 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 SMIM22K7EJ46 135 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 GPAA1O43292 621 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 CYP21A2P08686 494 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 NAA16Q6N069 864 aaPredicted RBP13.39□□□□□ -0.27
LINC00330-201ENST00000414562 ZGPATQ8N5A5 531 aaKnown RBP13.39□□□□□ -0.27
LINC00330-201ENST00000414562 ARMT1Q9H993 441 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
LINC00330-201ENST00000414562 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
LINC00330-201ENST00000414562 FKBP1AP62942 108 aaKnown RBP13.38□□□□□ -0.27
LINC00330-201ENST00000414562 EVX2Q03828 476 aa13.38□□□□□ -0.27
LINC00330-201ENST00000414562 CUL4AQ13619 759 aa13.38□□□□□ -0.27
LINC00330-201ENST00000414562 TBC1D22AQ8WUA7 517 aa13.38□□□□□ -0.27
LINC00330-201ENST00000414562 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
LINC00330-201ENST00000414562 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
LINC00330-201ENST00000414562 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
LINC00330-201ENST00000414562 DDNO94850 711 aaPredicted RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 ANKRD1Q15327 319 aa13.37□□□□□ -0.27
LINC00330-201ENST00000414562 AIDAQ96BJ3 306 aa13.37□□□□□ -0.27
LINC00330-201ENST00000414562 INTS4Q96HW7 963 aaKnown RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 STRBPQ96SI9 672 aaKnown RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
LINC00330-201ENST00000414562 GAKO14976 1311 aa13.37□□□□□ -0.27
LINC00330-201ENST00000414562 MBD4O95243 580 aa13.37□□□□□ -0.27
LINC00330-201ENST00000414562 APPP05067 770 aa13.37□□□□□ -0.27
LINC00330-201ENST00000414562 NUCB2P80303 420 aa13.37□□□□□ -0.27
LINC00330-201ENST00000414562 COL9A3Q14050 684 aaPredicted RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 APOBEC3HQ6NTF7 200 aaKnown RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 AATFQ9NY61 560 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC00330-201ENST00000414562 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
LINC00330-201ENST00000414562 RHBDL3P58872 404 aa13.36□□□□□ -0.27
LINC00330-201ENST00000414562 RAB3GAP1Q15042 981 aa13.36□□□□□ -0.27
LINC00330-201ENST00000414562 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
LINC00330-201ENST00000414562 SPTY2D1Q68D10 685 aaPredicted RBP13.36□□□□□ -0.27
LINC00330-201ENST00000414562 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
LINC00330-201ENST00000414562 MROH7-TTC4A0A0A0MT08 1334 aa13.36□□□□□ -0.27
LINC00330-201ENST00000414562 BAZ2AQ9UIF9 1905 aaKnown RBP13.36□□□□□ -0.27
LINC00330-201ENST00000414562 LAMA4Q16363 1823 aa13.35□□□□□ -0.27
LINC00330-201ENST00000414562 GPR75-ASB3A0A0A6YYF3 556 aa13.35□□□□□ -0.27
LINC00330-201ENST00000414562 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
LINC00330-201ENST00000414562 CRKP46108 304 aa13.35□□□□□ -0.27
LINC00330-201ENST00000414562 SH3RF3Q8TEJ3 882 aaPredicted RBP13.35□□□□□ -0.27
LINC00330-201ENST00000414562 FAM163AQ96GL9 167 aaPredicted RBP13.35□□□□□ -0.27
LINC00330-201ENST00000414562 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
LINC00330-201ENST00000414562 TCEANC2Q96MN5 208 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms