RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZNF70Q9UC06 446 aaPredicted RBP12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZNF532Q9HCE3 1301 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 ADM5C9JUS6 153 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 TOMM70O94826 608 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 TTC22Q5TAA0 569 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZSCAN25Q6NSZ9 544 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 APOBEC3HQ6NTF7 200 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 ADGRA1Q86SQ6 560 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 USP48Q86UV5 1035 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 KBTBD3Q8NAB2 608 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 MTMR14Q8NCE2 650 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 EVI5LQ96CN4 794 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 MYH2Q9UKX2 1941 aa12.62□□□□□ -0.39
HLA-DMB-257ENST00000414017 BAG3O95817 575 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 PICALMQ13492 652 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 CDC42EP5Q6NZY7 148 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 DLK2Q6UY11 383 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 KRT26Q7Z3Y9 468 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZBED3Q96IU2 234 aaPredicted RBP12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 OSBPL3Q9H4L5 887 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZNF408Q9H9D4 720 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 MAST2Q6P0Q8 1798 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 GAKO14976 1311 aa12.61□□□□□ -0.39
HLA-DMB-257ENST00000414017 MAGEB6P1A0A0J9YX57 407 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 TRAF5O00463 557 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 RNF113AO15541 343 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 ADD2P35612 726 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 TCP10Q12799 353 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 PRAMEF18Q5VWM3 479 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 SH3RF3Q8TEJ3 882 aaPredicted RBP12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 MRIQ9BWK5 157 aa12.6□□□□□ -0.39
HLA-DMB-257ENST00000414017 GPR75-ASB3A0A0A6YYF3 556 aa12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 MBD4O95243 580 aa12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 TNNI2P48788 182 aa12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 ARMT1Q9H993 441 aa12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
HLA-DMB-257ENST00000414017 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 SDSP20132 328 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 USP5P45974 858 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 NFIAQ12857 509 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 ZSCAN29Q8IWY8 852 aaPredicted RBP12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
HLA-DMB-257ENST00000414017 PLCG2P16885 1265 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 TNFAIP1Q13829 316 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 PRKG1Q13976 671 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 RASA3Q14644 834 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 TGFBRAP1Q8WUH2 860 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 APPBP2Q92624 585 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 TMEM39BQ9GZU3 492 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 PGAP2Q9UHJ9 254 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 PITPNM2Q9BZ72 1349 aa12.57□□□□□ -0.4
HLA-DMB-257ENST00000414017 M0R2C6 588 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 IGSF3O75054 1194 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 RHBDL3P58872 404 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 FSTL1Q12841 308 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 OSBP2Q969R2 916 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 CDCA5Q96FF9 252 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 DDX4Q9NQI0 724 aaKnown RBP12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 SAP30BPQ9UHR5 308 aaKnown RBP12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 MYH7P12883 1935 aa12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 POLR2AP24928 1970 aaKnown RBP12.56□□□□□ -0.4
HLA-DMB-257ENST00000414017 PRKAB2O43741 272 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 WDHD1O75717 1129 aaPredicted RBP12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 APPP05067 770 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 PPP4CP60510 307 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 ZMYM1Q5SVZ6 1142 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 CWC27Q6UX04 472 aaKnown RBP12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 ZFPM1Q8IX07 1006 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms