RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CCDC86Q9H6F5 360 aaKnown RBP6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 ITGB2P05107 769 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 NOS3P29474 1203 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 KIF4BQ2VIQ3 1234 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 ANKRD34AQ69YU3 496 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 RELL1Q8IUW5 271 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 PHC3Q8NDX5 983 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 GRIN3AQ8TCU5 1115 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 RNF34Q969K3 372 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 RHOVQ96L33 236 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 TMEM74Q96NL1 305 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 GGT7Q9UJ14 662 aa6.39□□□□□ -1.39
HMGB1P11-201ENST00000413899 ZNF862O60290 1169 aa6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 TIAF1O95411 115 aa6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 TCF3P15923 654 aa6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 TFE3P19532 575 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 HDLBPQ00341 1268 aaKnown RBP6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 LMNB2Q03252 620 aa6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 CCDC84Q86UT8 332 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 CBX8Q9HC52 389 aa6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 KCNQ5Q9NR82 932 aa6.38□□□□□ -1.39
HMGB1P11-201ENST00000413899 ALX3O95076 343 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 IREB2P48200 963 aaKnown RBP6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 PDE3AQ14432 1141 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 MAP3K11Q16584 847 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 PLA2G4EQ3MJ16 856 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 NUTM2GQ5VZR2 741 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 MAP1SQ66K74 1059 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 DZIP1LQ8IYY4 767 aaKnown RBP6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 AGGF1Q8N302 714 aaeCLIP6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 KCNB2Q92953 911 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 GAL3ST3Q96A11 431 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 WDR18Q9BV38 432 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 CEP41Q9BYV8 373 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 CYP4F12Q9HCS2 524 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 COPRSQ9NQ92 184 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 KBTBD4Q9NVX7 518 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 PCDHGC5Q9Y5F6 944 aa6.37□□□□□ -1.39
HMGB1P11-201ENST00000413899 AOC2O75106 756 aa6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 LIG1P18858 919 aa6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 TRIM42Q8IWZ5 723 aa6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 GPBAR1Q8TDU6 330 aa6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 WDR89Q96FK6 387 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 FAM46AQ96IP4 442 aaKnown RBP6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 ZC3H12CQ9C0D7 883 aaKnown RBP6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 TLR6Q9Y2C9 796 aa6.36□□□□□ -1.39
HMGB1P11-201ENST00000413899 SLFN14P0C7P3 912 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 ADH5P11766 374 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 GARTP22102 1010 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 GBP2P32456 591 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 SOX4Q06945 474 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 CAMK2GQ13555 558 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 UVSSAQ2YD98 709 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 ZC3H12AQ5D1E8 599 aaKnown RBP6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 FDX2Q6P4F2 183 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 MPRIPQ6WCQ1 1025 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 MEGF10Q96KG7 1140 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 UBL7Q96S82 380 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 MIR1-1HGQ9H1L0 117 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 GSX1Q9H4S2 264 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 DDX41Q9UJV9 622 aaKnown RBP6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 PCDHB5Q9Y5E4 795 aa6.35□□□□□ -1.39
HMGB1P11-201ENST00000413899 PF4P02776 101 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 GLB1P16278 677 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 LMNB1P20700 586 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 GATA4P43694 442 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 PTPN11Q06124 597 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 NT5DC4Q86YG4 428 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 RAD18Q9NS91 495 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 CRIM1Q9NZV1 1036 aa6.34□□□□□ -1.39
HMGB1P11-201ENST00000413899 TMPRSS2O15393 492 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 GREM1O60565 184 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 EIF4A3P38919 411 aaKnown RBP6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 PREPP48147 710 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 ERVK-24P63145 666 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 ID3Q02535 119 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 RAD51AP2Q09MP3 1159 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 SEPT6Q14141 434 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 NPM2Q86SE8 214 aaKnown RBP6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 ZNF654Q8IZM8 581 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 C12orf50Q8NA57 414 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 ADAMTS1Q9UHI8 967 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 PPP1R9AQ9ULJ8 1098 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 HIF3AQ9Y2N7 669 aa6.33□□□□□ -1.4
HMGB1P11-201ENST00000413899 FAM221AA4D161 298 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 MINDY4BA8MYZ0 360 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 F6X3S4 739 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 CILPO75339 1184 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 RACK1P63244 317 aaKnown RBP6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 RING1Q06587 406 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 ZNF394Q53GI3 561 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 AKAP4Q5JQC9 854 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 ZNF296Q8WUU4 475 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 ACSBG1Q96GR2 724 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 MYRFLQ96LU7 910 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 LRRC3Q9BY71 257 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms