RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 TRIM56Q9BRZ2 755 aaKnown RBP7.84□□□□□ -1.15
NOD1-203ENST00000413433 OXCT2Q9BYC2 517 aaPredicted RBP7.84□□□□□ -1.15
NOD1-203ENST00000413433 SLKQ9H2G2 1235 aaPredicted RBP7.84□□□□□ -1.15
NOD1-203ENST00000413433 CNTN3Q9P232 1028 aa7.84□□□□□ -1.15
NOD1-203ENST00000413433 AKAP2Q9Y2D5 859 aa7.84□□□□□ -1.15
NOD1-203ENST00000413433 SUPT16HQ9Y5B9 1047 aaKnown RBP7.84□□□□□ -1.15
NOD1-203ENST00000413433 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.16
NOD1-203ENST00000413433 PLEKHH2Q8IVE3 1493 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 MBD5Q9P267 1494 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 CCDC85CA6NKD9 419 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 CHMP4BP1P59074 171 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 RAB33AQ14088 237 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 KIAA0319Q5VV43 1072 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 Q8N3U1 123 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 C3orf58Q8NDZ4 430 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 NEDD1Q8NHV4 660 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 HNRNPLLQ8WVV9 542 aaKnown RBP7.83□□□□□ -1.16
NOD1-203ENST00000413433 EAF1Q96JC9 268 aaPredicted RBP7.83□□□□□ -1.16
NOD1-203ENST00000413433 DEPDC7Q96QD5 511 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 BRINP2Q9C0B6 783 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 MBIPQ9NS73 344 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 SNTG2Q9NY99 539 aa7.83□□□□□ -1.16
NOD1-203ENST00000413433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.83□□□□□ -1.16
NOD1-203ENST00000413433 SPATA31C2B4DYI2 1134 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 PPP1R12AO14974 1030 aaPredicted RBP7.82□□□□□ -1.16
NOD1-203ENST00000413433 FBXO24O75426 580 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 BCRP11274 1271 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 ATP4AP20648 1035 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 HSPA1LP34931 641 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 SOX9P48436 509 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 TYRO3Q06418 890 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 SNAP47Q5SQN1 464 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 GLIS3Q8NEA6 775 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 NT5C1AQ9BXI3 368 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 KANSL3Q9P2N6 904 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 COL4A3BPQ9Y5P4 624 aa7.82□□□□□ -1.16
NOD1-203ENST00000413433 CLTCQ00610 1675 aaKnown RBP7.82□□□□□ -1.16
NOD1-203ENST00000413433 A0A1W2PP55 124 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 TSPY4P0CV99 314 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 TSPY10P0CW01 314 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 FAM160A1Q05DH4 1040 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 APOBRQ0VD83 1088 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 PRPF40BQ6NWY9 871 aaKnown RBP7.81□□□□□ -1.16
NOD1-203ENST00000413433 SV2BQ7L1I2 683 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 GMCL1Q96IK5 515 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 RNPC3Q96LT9 517 aaKnown RBP7.81□□□□□ -1.16
NOD1-203ENST00000413433 ZIC5Q96T25 663 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 SRRTQ9BXP5 876 aaKnown RBP7.81□□□□□ -1.16
NOD1-203ENST00000413433 PRKAG3Q9UGI9 489 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 TNRQ92752 1358 aa7.81□□□□□ -1.16
NOD1-203ENST00000413433 CEP162Q5TB80 1403 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 KLF4O43474 513 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 DNAJC6O75061 913 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 POU4F2Q12837 409 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 TNNI3KQ59H18 835 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 FOXR1Q6PIV2 292 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 TPTE2Q6XPS3 522 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 THEMISQ8N1K5 641 aaPredicted RBP7.8□□□□□ -1.16
NOD1-203ENST00000413433 RHOVQ96L33 236 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 LIN7BQ9HAP6 207 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 SPC25Q9HBM1 224 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 LATS2Q9NRM7 1088 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 IFT57Q9NWB7 429 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 PRKAB1Q9Y478 270 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 TCOF1Q13428 1488 aaKnown RBP7.8□□□□□ -1.16
NOD1-203ENST00000413433 PLXNC1O60486 1568 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 TIAM1Q13009 1591 aa7.8□□□□□ -1.16
NOD1-203ENST00000413433 INO80Q9ULG1 1556 aaPredicted RBP7.8□□□□□ -1.16
NOD1-203ENST00000413433 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 TOM1O60784 492 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 CDC45O75419 566 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 EGFRP00533 1210 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 LIG3P49916 1009 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 IFRD2Q12894 506 aaPredicted RBP7.79□□□□□ -1.16
NOD1-203ENST00000413433 RASA3Q14644 834 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 TAF7LQ5H9L4 462 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 FBXL19Q6PCT2 694 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 PRICKLE2Q7Z3G6 844 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 LRP10Q7Z4F1 713 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 PHC3Q8NDX5 983 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 ANKRD24Q8TF21 1146 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 NKD1Q969G9 470 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 CEP44Q9C0F1 390 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 ZFYVE1Q9HBF4 777 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 LRRC4BQ9NT99 713 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 UBP1Q9NZI7 540 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 A2ML1A8K2U0 1454 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 NCOA2Q15596 1464 aa7.79□□□□□ -1.16
NOD1-203ENST00000413433 CEP170BQ9Y4F5 1589 aaPredicted RBP7.79□□□□□ -1.16
NOD1-203ENST00000413433 A0A1W2PNR3 127 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 EIF5BO60841 1220 aaKnown RBP7.78□□□□□ -1.16
NOD1-203ENST00000413433 PF4P02776 101 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
NOD1-203ENST00000413433 LMNB1P20700 586 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 BAG6P46379 1132 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 PCNX4Q63HM2 1172 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms