RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 GOLM1Q8NBJ4 401 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 STK35Q8TDR2 534 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-204ENST00000412061 MIR1-1HGQ9H1L0 117 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 ROBO2Q9HCK4 1378 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 CYP11A1P05108 521 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 ATF4P18848 351 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-204ENST00000412061 ZNF252P-AS1Q0IIN9 211 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 XP32Q5T750 250 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 RASIP1Q5U651 963 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 HGSNATQ68CP4 663 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 SCARA3Q6AZY7 606 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 NOP9Q86U38 636 aaKnown RBP6.5□□□□□ -1.37
BRCA1-204ENST00000412061 MAP4K3Q8IVH8 894 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 KLHL23Q8NBE8 558 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 LNPKQ9C0E8 428 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 PCDHB5Q9Y5E4 795 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 GSTP1P09211 210 aaKnown RBP6.49□□□□□ -1.37
BRCA1-204ENST00000412061 NID1P14543 1247 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 POU4F3Q15319 338 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 PLA2G4EQ3MJ16 856 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 FAM196AQ6ZSG2 479 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 PDZD3Q86UT5 571 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 JARID2Q92833 1246 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-204ENST00000412061 SEC16BQ96JE7 1060 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 CORO1BQ9BR76 489 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 CARD10Q9BWT7 1032 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 ENAMQ9NRM1 1142 aa6.49□□□□□ -1.37
BRCA1-204ENST00000412061 CNTNAP5Q8WYK1 1306 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 TRIM37O94972 964 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 F13A1P00488 732 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 DGKGP49619 791 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 HNRNPUQ00839 825 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-204ENST00000412061 APOBRQ0VD83 1088 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 COL9A2Q14055 689 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-204ENST00000412061 SEPT6Q14141 434 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 SETDB1Q15047 1291 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 BNC2Q6ZN30 1099 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-204ENST00000412061 DMRTC2Q8IXT2 367 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-204ENST00000412061 NEDD1Q8NHV4 660 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 GRIN3AQ8TCU5 1115 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 DCAF11Q8TEB1 546 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 GATAD2BQ8WXI9 593 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 DHX38Q92620 1227 aaKnown RBP6.48□□□□□ -1.37
BRCA1-204ENST00000412061 KCNB2Q92953 911 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 NKD1Q969G9 470 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 ARMC5Q96C12 935 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 DCAF5Q96JK2 942 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-204ENST00000412061 UBP1Q9NZI7 540 aa6.48□□□□□ -1.37
BRCA1-204ENST00000412061 ADAM23O75077 832 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 FGRP09769 529 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 COL9A3Q14050 684 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-204ENST00000412061 MPP2Q14168 576 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 MAP1SQ66K74 1059 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-204ENST00000412061 ILDR2Q71H61 639 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 MCF2L2Q86YR7 1114 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 DTWD1Q8N5C7 304 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 GAL3ST3Q96A11 431 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 KLHDC7BQ96G42 594 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 SPOCK3Q9BQ16 436 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 LRRC3Q9BY71 257 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 NRSN2Q9GZP1 204 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 RRAGCQ9HB90 399 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 EFR3BQ9Y2G0 817 aa6.47□□□□□ -1.37
BRCA1-204ENST00000412061 FAM221AA4D161 298 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 BPNT1O95861 308 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 MAOBP27338 520 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 GTF2F1P35269 517 aaKnown RBP eCLIP6.46□□□□□ -1.38
BRCA1-204ENST00000412061 CRKP46108 304 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 NASPP49321 788 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-204ENST00000412061 CWF19L2Q2TBE0 894 aaKnown RBP6.46□□□□□ -1.38
BRCA1-204ENST00000412061 HP1BP3Q5SSJ5 553 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-204ENST00000412061 TRAPPC3LQ5T215 181 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 SLITRK4Q8IW52 837 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 ZC3H12CQ9C0D7 883 aaKnown RBP6.46□□□□□ -1.38
BRCA1-204ENST00000412061 GINM1Q9NU53 330 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 STRIP2Q9ULQ0 834 aa6.46□□□□□ -1.38
BRCA1-204ENST00000412061 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
BRCA1-204ENST00000412061 ARID4BQ4LE39 1312 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-204ENST00000412061 TLDC2A0PJX2 215 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 MSTNO14793 375 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
BRCA1-204ENST00000412061 CILPO75339 1184 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 PROCP04070 461 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 SSBP05455 408 aaKnown RBP eCLIP6.45□□□□□ -1.38
BRCA1-204ENST00000412061 CD68P34810 354 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-204ENST00000412061 SOX9P48436 509 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 NLRP12P59046 1061 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 PDE3AQ14432 1141 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 SEZ6Q53EL9 994 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 GALNT11Q8NCW6 608 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 FBXO27Q8NI29 283 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 ACSBG1Q96GR2 724 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 USP26Q9BXU7 913 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 CACNA2D2Q9NY47 1150 aa6.45□□□□□ -1.38
BRCA1-204ENST00000412061 TM4SF5O14894 197 aa6.44□□□□□ -1.38
BRCA1-204ENST00000412061 STK10O94804 968 aaKnown RBP6.44□□□□□ -1.38
BRCA1-204ENST00000412061 HOXB4P17483 251 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms