RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ERC2O15083 957 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 LDHCP07864 332 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 HSPA6P17066 643 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 PDE1AP54750 535 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 PRAMEF18Q5VWM3 479 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 ZNF408Q9H9D4 720 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 STAP2Q9UGK3 403 aa16.95■□□□□ 0.3
CPNE1-206ENST00000412056 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
CPNE1-206ENST00000412056 GLRX3O76003 335 aaKnown RBP16.94■□□□□ 0.3
CPNE1-206ENST00000412056 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-206ENST00000412056 APLP1P51693 650 aa16.94■□□□□ 0.3
CPNE1-206ENST00000412056 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
CPNE1-206ENST00000412056 MAGEB6Q8N7X4 407 aa16.94■□□□□ 0.3
CPNE1-206ENST00000412056 TMOD2Q9NZR1 351 aa16.94■□□□□ 0.3
CPNE1-206ENST00000412056 CNTNAP1P78357 1384 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 PAPPA2Q9BXP8 1791 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 IGSF3O75054 1194 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 CELF2O95319 508 aaKnown RBP16.93■□□□□ 0.3
CPNE1-206ENST00000412056 CYP7A1P22680 504 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 PDE4AP27815 886 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 DEFB129Q9H1M3 183 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 USP40Q9NVE5 1235 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 MYH1P12882 1939 aa16.93■□□□□ 0.3
CPNE1-206ENST00000412056 PDE6AP16499 860 aa16.92■□□□□ 0.3
CPNE1-206ENST00000412056 HTRA3P83110 453 aa16.92■□□□□ 0.3
CPNE1-206ENST00000412056 NFIAQ12857 509 aa16.92■□□□□ 0.3
CPNE1-206ENST00000412056 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
CPNE1-206ENST00000412056 RASA3Q14644 834 aa16.92■□□□□ 0.3
CPNE1-206ENST00000412056 CST9Q5W186 159 aa16.92■□□□□ 0.3
CPNE1-206ENST00000412056 AATFQ9NY61 560 aaKnown RBP eCLIP16.92■□□□□ 0.3
CPNE1-206ENST00000412056 SSC5DA1L4H1 1573 aa16.92■□□□□ 0.3
CPNE1-206ENST00000412056 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 NAV1Q8NEY1 1877 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 TMEM88BA6NKF7 163 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 CHGBP05060 677 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 RHBDL3P58872 404 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 SLFNL1Q499Z3 407 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 SLC9C2Q5TAH2 1124 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 FKBP1CQ5VVH2 108 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
CPNE1-206ENST00000412056 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 PPP2R3BQ9Y5P8 575 aa16.91■□□□□ 0.3
CPNE1-206ENST00000412056 TCRBV5S4A2TA0A5A2 114 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 ADD2P35612 726 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 TNNI2P48788 182 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
CPNE1-206ENST00000412056 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-206ENST00000412056 CDAN1Q8IWY9 1227 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 SH3RF3Q8TEJ3 882 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-206ENST00000412056 FAM198AQ9UFP1 575 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 ZNF532Q9HCE3 1301 aa16.9■□□□□ 0.3
CPNE1-206ENST00000412056 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.3
CPNE1-206ENST00000412056 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-206ENST00000412056 RGS3P49796 1198 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 PPP4CP60510 307 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 TCP10Q12799 353 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 FAM83AQ86UY5 434 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 TEPSINQ96N21 525 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 IDI2Q9BXS1 227 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.89■□□□□ 0.293e-7■■■■□ 26
CPNE1-206ENST00000412056 OSBPL3Q9H4L5 887 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
CPNE1-206ENST00000412056 CREBZFQ9NS37 354 aa16.89■□□□□ 0.29
CPNE1-206ENST00000412056 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
CPNE1-206ENST00000412056 DDX60LQ5H9U9 1706 aaKnown RBP16.89■□□□□ 0.29
CPNE1-206ENST00000412056 BAG3O95817 575 aa16.88■□□□□ 0.29
CPNE1-206ENST00000412056 PICALMQ13492 652 aa16.88■□□□□ 0.29
CPNE1-206ENST00000412056 NBPF12Q5TAG4 269 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-206ENST00000412056 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-206ENST00000412056 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
CPNE1-206ENST00000412056 GBA2Q9HCG7 927 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-206ENST00000412056 PLCG2P16885 1265 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 NF2P35240 595 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 ERICH6BQ5W0A0 696 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 FAM151AQ8WW52 585 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 ABT1Q9ULW3 272 aaKnown RBP16.87■□□□□ 0.29
CPNE1-206ENST00000412056 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
CPNE1-206ENST00000412056 MAGEB6P1A0A0J9YX57 407 aa16.86■□□□□ 0.29
CPNE1-206ENST00000412056 ENTPD3O75355 529 aa16.86■□□□□ 0.29
CPNE1-206ENST00000412056 PRKG1Q13976 671 aa16.86■□□□□ 0.29
CPNE1-206ENST00000412056 UBE3CQ15386 1083 aa16.86■□□□□ 0.29
CPNE1-206ENST00000412056 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
CPNE1-206ENST00000412056 RIOK1Q9BRS2 568 aaKnown RBP16.86■□□□□ 0.29
CPNE1-206ENST00000412056 TLL2Q9Y6L7 1015 aa16.86■□□□□ 0.29
CPNE1-206ENST00000412056 SUPT20HL1Q3ZLR7 823 aa16.85■□□□□ 0.29
CPNE1-206ENST00000412056 SKAP1Q86WV1 359 aa16.85■□□□□ 0.29
CPNE1-206ENST00000412056 LCORLQ8N3X6 602 aa16.85■□□□□ 0.29
CPNE1-206ENST00000412056 C2orf69Q8N8R5 385 aa16.85■□□□□ 0.29
CPNE1-206ENST00000412056 TGFBRAP1Q8WUH2 860 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms