RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GOLGA6L4A6NEF3 574 aa12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 STARD3NLO95772 234 aa12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 USP5P45974 858 aa12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 CCT4P50991 539 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 TUBB2AQ13885 445 aa12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 TUBB2BQ9BVA1 445 aa12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 DNAJC25Q9H1X3 360 aa12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-204ENST00000409357 ZPR1O75312 459 aa12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 ATL3Q6DD88 541 aa12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 TRIM65Q6PJ69 517 aa12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 LEO1Q8WVC0 666 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 NAT10Q9H0A0 1025 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 NARFQ9UHQ1 456 aa12.28□□□□□ -0.44
NIF3L1-204ENST00000409357 POLRMTO00411 1230 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 EIF3JO75822 258 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 LMAN1P49257 510 aa12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 SPATA32Q96LK8 384 aa12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 RBM28Q9NW13 759 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 TRMT1Q9NXH9 659 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 RAI14Q9P0K7 980 aa12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 TBC1D2BQ9UPU7 963 aa12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.45
NIF3L1-204ENST00000409357 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 MYO1BO43795 1136 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 C21orf2O43822 256 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 PPFIA4O75335 1185 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 GNAI3P08754 354 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 TM4SF1P30408 202 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 EVCP57679 992 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 NFIXQ14938 502 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 NBPF10Q6P3W6 841 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 CKAP2LQ8IYA6 745 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 NBPF15Q8N660 670 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 TMX1Q9H3N1 280 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 CARMIL3Q8ND23 1372 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 ANKRD31Q8N7Z5 1873 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 BECN2A8MW95 431 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 KIF3CO14782 793 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 SMC2O95347 1197 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 CALRP27797 417 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 CAMK4Q16566 473 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 NBPF20Q3BBV1 942 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 TADA2BQ86TJ2 420 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 DHX40Q8IX18 779 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 ANKRD20A12PQ8NF67 263 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 DRC1Q96MC2 740 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 TEX13AQ9BXU3 409 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 RAB21Q9UL25 225 aa12.26□□□□□ -0.45
NIF3L1-204ENST00000409357 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 SNRPA1P09661 255 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 SFPQP23246 707 aaKnown RBP eCLIP12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 MAP2K2P36507 400 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 IL6STP40189 918 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 HSP90AB3PQ58FF7 597 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 NOL8Q76FK4 1167 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 HDXQ7Z353 690 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 CEP57L1Q8IYX8 460 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 ZBTB9Q96C00 473 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 ZCCHC17Q9NP64 241 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 CFAP45Q9UL16 551 aa12.25□□□□□ -0.45
NIF3L1-204ENST00000409357 RAB11FIP3O75154 756 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 GNAI2P04899 355 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 DPEP1P16444 411 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 KCNA3P22001 575 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 TXLNAP40222 546 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 LONRF2Q1L5Z9 754 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 LRRN4CLQ8ND94 238 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 MEIS3Q99687 375 aa12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 COL11A2P13942 1736 aaPredicted RBP12.24□□□□□ -0.45
NIF3L1-204ENST00000409357 NR1I2O75469 434 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 CAMTA2O94983 1202 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 CHRNA5P30532 468 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 DNAJC21Q5F1R6 531 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 MSANTD4Q8NCY6 345 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 PGBD1Q96JS3 809 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 ACBD3Q9H3P7 528 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms