RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 GNPATO15228 680 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 CDKL5O76039 1030 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 TMED8Q6PL24 325 aaPredicted RBP7.49□□□□□ -1.21
MRE11-204ENST00000407439 CYB5R4Q7L1T6 521 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 STAG1Q8WVM7 1258 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 ZNF396Q96N95 335 aaPredicted RBP7.49□□□□□ -1.21
MRE11-204ENST00000407439 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 LRP2BPQ9P2M1 347 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 CCNL1Q9UK58 526 aaPredicted RBP7.49□□□□□ -1.21
MRE11-204ENST00000407439 RTCBQ9Y3I0 505 aaKnown RBP7.49□□□□□ -1.21
MRE11-204ENST00000407439 LY75O60449 1722 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 MYH15Q9Y2K3 1946 aa7.49□□□□□ -1.21
MRE11-204ENST00000407439 ZPR1O75312 459 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 GTF2E1P29083 439 aaPredicted RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 RCAN1P53805 252 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 KCNQ4P56696 695 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 C1QBPQ07021 282 aaKnown RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 CAVIN4Q5BKX8 364 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 AKNAD1Q5T1N1 836 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 BRAPQ7Z569 592 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 NBPF5PQ86XG9 351 aaPredicted RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 LCORLQ8N3X6 602 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 IGDCC4Q8TDY8 1250 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 C8orf76Q96K31 380 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 NLRP3Q96P20 1036 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 KRT23Q9C075 422 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 CLSTN2Q9H4D0 955 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 ARMT1Q9H993 441 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 ORC3Q9UBD5 711 aaPredicted RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 DENND2AQ9ULE3 1009 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 NOL7Q9UMY1 257 aaKnown RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 B4E1Z4 1266 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 ONECUT3O60422 494 aaPredicted RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 METAP2P50579 478 aaKnown RBP eCLIP7.48□□□□□ -1.21
MRE11-204ENST00000407439 CPLX2Q6PUV4 134 aaKnown RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 TPTE2Q6XPS3 522 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 BICD2Q8TD16 824 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 CELF1Q92879 486 aaKnown RBP7.48□□□□□ -1.21
MRE11-204ENST00000407439 USP28Q96RU2 1077 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 LY9Q9HBG7 655 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 CASZ1Q86V15 1759 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 C4AP0C0L4 1744 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 C4BP0C0L5 1744 aa7.48□□□□□ -1.21
MRE11-204ENST00000407439 CACNA1SQ13698 1873 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 NR1I2O75469 434 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 GYG1P46976 350 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 TDO2P48775 406 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 RPS8P62241 208 aaKnown RBP7.47□□□□□ -1.21
MRE11-204ENST00000407439 MFSD6Q6ZSS7 791 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 FBXO33Q7Z6M2 555 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 FAM200AQ8TCP9 573 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 FAM84BQ96KN1 310 aaPredicted RBP7.47□□□□□ -1.21
MRE11-204ENST00000407439 GJD4Q96KN9 370 aaPredicted RBP7.47□□□□□ -1.21
MRE11-204ENST00000407439 TNMDQ9H2S6 317 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 RNF41Q9H4P4 317 aaPredicted RBP7.47□□□□□ -1.21
MRE11-204ENST00000407439 POLR3EQ9NVU0 708 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 TAF1LQ8IZX4 1826 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 ZBTB43O43298 467 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 IGSF3O75054 1194 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 CAVIN2O95810 425 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 SART3Q15020 963 aaKnown RBP7.47□□□□□ -1.21
MRE11-204ENST00000407439 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 VPS37DQ86XT2 251 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 NKX2-3Q8TAU0 364 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 RIOK1Q9BRS2 568 aaKnown RBP7.47□□□□□ -1.21
MRE11-204ENST00000407439 ANKRD2Q9GZV1 360 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 RTEL1Q9NZ71 1219 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 SRP68Q9UHB9 627 aaKnown RBP7.47□□□□□ -1.21
MRE11-204ENST00000407439 ANAPC4Q9UJX5 808 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 SLC4A4Q9Y6R1 1079 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 STK36Q9NRP7 1315 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 CHD4Q14839 1912 aa7.47□□□□□ -1.21
MRE11-204ENST00000407439 PRKAB2O43741 272 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 KDM4AO75164 1064 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 YEATS4O95619 227 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 PCP11498 1178 aaKnown RBP7.46□□□□□ -1.21
MRE11-204ENST00000407439 CYP7A1P22680 504 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 KIF23Q02241 960 aaPredicted RBP7.46□□□□□ -1.21
MRE11-204ENST00000407439 TYRO3Q06418 890 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 NTRK3Q16288 839 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 TMEM67Q5HYA8 995 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 ADGRA1Q86SQ6 560 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 AMIGO3Q86WK7 504 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 MICU3Q86XE3 530 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 KCNG4Q8TDN1 519 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 ARHGEF1Q92888 912 aaKnown RBP7.46□□□□□ -1.21
MRE11-204ENST00000407439 ZSWIM5Q9P217 1185 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 USP25Q9UHP3 1055 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 ZKSCAN5Q9Y2L8 839 aa7.46□□□□□ -1.21
MRE11-204ENST00000407439 A0A1W2PQ27 194 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 A0A1W2PQ64 194 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 A0A1W2PQD8 194 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 CTAGE5O15320 804 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 PPFIA3O75145 1194 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 MSNP26038 577 aaKnown RBP7.46□□□□□ -1.22
MRE11-204ENST00000407439 GUCY1B3Q02153 619 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 MYSM1Q5VVJ2 828 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 TMTC2Q8N394 836 aa7.46□□□□□ -1.22
MRE11-204ENST00000407439 MIGA1Q8NAN2 632 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms