RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ELNP15502 786 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 LIG1P18858 919 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 LMNB1P20700 586 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 LMNB2Q03252 620 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 LRRC14Q15048 493 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 PRRT3Q5FWE3 981 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 SNAP47Q5SQN1 464 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 BNC2Q6ZN30 1099 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 GOLM1Q8NBJ4 401 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 GPBAR1Q8TDU6 330 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 ZNF296Q8WUU4 475 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 GAL3ST3Q96A11 431 aa7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 SCARF2Q96GP6 870 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P19-201ENST00000403971 ZNF862O60290 1169 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 SELPP16109 830 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 PAK2Q13177 524 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 KIAA1211Q6ZU35 1233 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 ACAD11Q709F0 780 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 TRIM42Q8IWZ5 723 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 SPON2Q9BUD6 331 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 MIR1-1HGQ9H1L0 117 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 CAPN10Q9HC96 672 aa7.97□□□□□ -1.13
HMGB3P19-201ENST00000403971 F13A1P00488 732 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 CDK8P49336 464 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 ZC3H6P61129 1189 aaKnown RBP7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 NAALADL2Q58DX5 795 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 IGF2-ASQ6U949 168 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 KIAA0825Q8IV33 1275 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 AGGF1Q8N302 714 aaeCLIP7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 FBXO27Q8NI29 283 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 ACSBG1Q96GR2 724 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 EAF1Q96JC9 268 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 TINF2Q9BSI4 451 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 CACNA2D2Q9NY47 1150 aa7.96□□□□□ -1.14
HMGB3P19-201ENST00000403971 TRIM37O94972 964 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 ALX3O95076 343 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 SPATA31C1P0DKV0 1188 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 DCAF11Q8TEB1 546 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 RUSC1Q9BVN2 902 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 KCNQ5Q9NR82 932 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 UBP1Q9NZI7 540 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 INPP5FQ9Y2H2 1132 aa7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
HMGB3P19-201ENST00000403971 FAM221AA4D161 298 aa7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 TLR3O15455 904 aaKnown RBP7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 EIF4EBP3O60516 100 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 GREM1O60565 184 aa7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 CRKP46108 304 aa7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 KRT82Q9NSB4 513 aa7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
HMGB3P19-201ENST00000403971 AOC2O75106 756 aa7.93□□□□□ -1.14
HMGB3P19-201ENST00000403971 EXOSC6Q5RKV6 272 aaKnown RBP7.93□□□□□ -1.14
HMGB3P19-201ENST00000403971 FAM196AQ6ZSG2 479 aa7.93□□□□□ -1.14
HMGB3P19-201ENST00000403971 GATAD2BQ8WXI9 593 aa7.93□□□□□ -1.14
HMGB3P19-201ENST00000403971 TMPRSS13Q9BYE2 586 aa7.93□□□□□ -1.14
HMGB3P19-201ENST00000403971 USP21Q9UK80 565 aa7.93□□□□□ -1.14
HMGB3P19-201ENST00000403971 F8W735 103 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 INPP5AQ14642 412 aa7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 KIF4BQ2VIQ3 1234 aa7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 AKAP4Q5JQC9 854 aa7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 GPRASP2Q96D09 838 aa7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 C8orf37Q96NL8 207 aa7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 RAD18Q9NS91 495 aa7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 CSADQ9Y600 493 aa7.92□□□□□ -1.14
HMGB3P19-201ENST00000403971 FAM181BA6NEQ2 426 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 DCDC2CA8MYV0 355 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 CILPO75339 1184 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 GJA8P48165 433 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 LRFN4Q6PJG9 635 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 CCDC84Q86UT8 332 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 LENG1Q96BZ8 264 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 NT5C1AQ9BXI3 368 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 RNF208Q9H0X6 261 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 PPP1R9AQ9ULJ8 1098 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 PCDHGC5Q9Y5F6 944 aa7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 ZCCHC6Q5VYS8 1495 aaKnown RBP7.91□□□□□ -1.14
HMGB3P19-201ENST00000403971 MEGF11A6BM72 1044 aa7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 DRD2P14416 443 aa7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 SEZ6Q53EL9 994 aa7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 WIPI1Q5MNZ9 446 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 NUTM2GQ5VZR2 741 aa7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 SCARA3Q6AZY7 606 aa7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 PLPPR2Q96GM1 343 aa7.9□□□□□ -1.14
HMGB3P19-201ENST00000403971 APBA3O96018 575 aa7.89□□□□□ -1.15
HMGB3P19-201ENST00000403971 NOS3P29474 1203 aa7.89□□□□□ -1.15
HMGB3P19-201ENST00000403971 RPL6Q02878 288 aaKnown RBP7.89□□□□□ -1.15
HMGB3P19-201ENST00000403971 HP1BP3Q5SSJ5 553 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P19-201ENST00000403971 C12orf40Q86WS4 652 aa7.89□□□□□ -1.15
HMGB3P19-201ENST00000403971 TMEM130Q8N3G9 435 aa7.89□□□□□ -1.15
HMGB3P19-201ENST00000403971 AKTIPQ9H8T0 292 aa7.89□□□□□ -1.15
HMGB3P19-201ENST00000403971 ABCC9O60706 1549 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 KRBA1A5PL33 1030 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 TMPRSS2O15393 492 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 BPNT1O95861 308 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 SLFN14P0C7P3 912 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms