RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DTNBO60941 627 aa30.29■■■□□ 2.44
CPNE1-205ENST00000401607 TRDNQ13061 729 aa30.29■■■□□ 2.44
CPNE1-205ENST00000401607 CCDC125Q86Z20 511 aa30.29■■■□□ 2.44
CPNE1-205ENST00000401607 AATFQ9NY61 560 aaKnown RBP eCLIP30.29■■■□□ 2.44
CPNE1-205ENST00000401607 GJB2P29033 226 aa30.28■■■□□ 2.44
CPNE1-205ENST00000401607 GPHNQ9NQX3 736 aaPredicted RBP30.28■■■□□ 2.44
CPNE1-205ENST00000401607 SLC16A10Q8TF71 515 aa30.28■■■□□ 2.44
CPNE1-205ENST00000401607 COA1Q9GZY4 146 aa30.28■■■□□ 2.44
CPNE1-205ENST00000401607 TMX4Q9H1E5 349 aaPredicted RBP30.28■■■□□ 2.44
CPNE1-205ENST00000401607 INCENPQ9NQS7 918 aa30.27■■■□□ 2.44
CPNE1-205ENST00000401607 FAM205AQ6ZU69 1335 aa30.27■■■□□ 2.44
CPNE1-205ENST00000401607 PFKFB2O60825 505 aa30.26■■■□□ 2.44
CPNE1-205ENST00000401607 BAG4O95429 457 aaKnown RBP30.26■■■□□ 2.44
CPNE1-205ENST00000401607 EVCP57679 992 aa30.26■■■□□ 2.44
CPNE1-205ENST00000401607 AKNAD1Q5T1N1 836 aa30.26■■■□□ 2.44
CPNE1-205ENST00000401607 CYB5R4Q7L1T6 521 aa30.26■■■□□ 2.44
CPNE1-205ENST00000401607 CNKSR1Q969H4 720 aa30.26■■■□□ 2.44
CPNE1-205ENST00000401607 ZC3H12CQ9C0D7 883 aaKnown RBP30.26■■■□□ 2.44
CPNE1-205ENST00000401607 B4E1Z4 1266 aa30.26■■■□□ 2.43
CPNE1-205ENST00000401607 SCRN1Q12765 414 aa30.26■■■□□ 2.43
CPNE1-205ENST00000401607 STAG1Q8WVM7 1258 aa30.26■■■□□ 2.43
CPNE1-205ENST00000401607 PPARAQ07869 468 aa30.25■■■□□ 2.43
CPNE1-205ENST00000401607 GIMAP6Q6P9H5 292 aa30.25■■■□□ 2.43
CPNE1-205ENST00000401607 ANAPC4Q9UJX5 808 aa30.25■■■□□ 2.43
CPNE1-205ENST00000401607 DDX11L8A8MPP1 907 aa30.24■■■□□ 2.43
CPNE1-205ENST00000401607 GSTO1P78417 241 aa30.24■■■□□ 2.43
CPNE1-205ENST00000401607 DIXDC1Q155Q3 683 aa30.24■■■□□ 2.43
CPNE1-205ENST00000401607 ZNF274Q96GC6 653 aaPredicted RBP30.24■■■□□ 2.43
CPNE1-205ENST00000401607 CRNKL1Q9BZJ0 848 aaKnown RBP30.24■■■□□ 2.43
CPNE1-205ENST00000401607 DLEC1Q9Y238 1755 aa30.24■■■□□ 2.43
CPNE1-205ENST00000401607 BAZ2AQ9UIF9 1905 aaKnown RBP30.23■■■□□ 2.43
CPNE1-205ENST00000401607 SYT1P21579 422 aa30.23■■■□□ 2.43
CPNE1-205ENST00000401607 MFSD14BQ5SR56 506 aa30.23■■■□□ 2.43
CPNE1-205ENST00000401607 FOXD4L5Q5VV16 416 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-205ENST00000401607 TBC1D22AQ8WUA7 517 aa30.23■■■□□ 2.43
CPNE1-205ENST00000401607 FOXD4L4Q8WXT5 416 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-205ENST00000401607 PDIA3P30101 505 aaKnown RBP30.23■■■□□ 2.43
CPNE1-205ENST00000401607 C7orf43Q8WVR3 580 aa30.23■■■□□ 2.43
CPNE1-205ENST00000401607 WDR33Q9C0J8 1336 aaKnown RBP30.23■■■□□ 2.43
CPNE1-205ENST00000401607 SNED1Q8TER0 1413 aa30.22■■■□□ 2.43
CPNE1-205ENST00000401607 MFSD6Q6ZSS7 791 aa30.22■■■□□ 2.43
CPNE1-205ENST00000401607 CNNM2Q9H8M5 875 aa30.22■■■□□ 2.43
CPNE1-205ENST00000401607 MROH7-TTC4A0A0A0MT08 1334 aa30.21■■■□□ 2.43
CPNE1-205ENST00000401607 GTF2IP78347 998 aa30.21■■■□□ 2.43
CPNE1-205ENST00000401607 EYA3Q99504 573 aa30.21■■■□□ 2.43
CPNE1-205ENST00000401607 DCP1AQ9NPI6 582 aaPredicted RBP30.21■■■□□ 2.43
CPNE1-205ENST00000401607 MYH2Q9UKX2 1941 aa30.21■■■□□ 2.43
CPNE1-205ENST00000401607 MINDY4BA8MYZ0 360 aa30.2■■■□□ 2.43
CPNE1-205ENST00000401607 SMIM22K7EJ46 135 aa30.2■■■□□ 2.43
CPNE1-205ENST00000401607 STX6O43752 255 aa30.2■■■□□ 2.43
CPNE1-205ENST00000401607 KRT23Q9C075 422 aa30.2■■■□□ 2.43
CPNE1-205ENST00000401607 BRPF3Q9ULD4 1205 aa30.2■■■□□ 2.43
CPNE1-205ENST00000401607 SH2B2O14492 632 aaPredicted RBP30.2■■■□□ 2.42
CPNE1-205ENST00000401607 LDHCP07864 332 aa30.2■■■□□ 2.42
CPNE1-205ENST00000401607 PPP4CP60510 307 aa30.2■■■□□ 2.42
CPNE1-205ENST00000401607 DOK7Q18PE1 504 aa30.2■■■□□ 2.42
CPNE1-205ENST00000401607 CTR9Q6PD62 1173 aa30.2■■■□□ 2.42
CPNE1-205ENST00000401607 RTFDC1Q9BY42 306 aaPredicted RBP30.2■■■□□ 2.42
CPNE1-205ENST00000401607 ATP8A2Q9NTI2 1148 aa30.2■■■□□ 2.42
CPNE1-205ENST00000401607 ZNF219Q9P2Y4 722 aaPredicted RBP30.2■■■□□ 2.42
CPNE1-205ENST00000401607 RNF41Q9H4P4 317 aaPredicted RBP30.19■■■□□ 2.42
CPNE1-205ENST00000401607 ZSWIM5Q9P217 1185 aa30.19■■■□□ 2.42
CPNE1-205ENST00000401607 LAMB1P07942 1786 aa30.19■■■□□ 2.42
CPNE1-205ENST00000401607 CYP2D7A0A087X1C5 515 aa30.18■■■□□ 2.42
CPNE1-205ENST00000401607 JAK2O60674 1132 aa30.18■■■□□ 2.42
CPNE1-205ENST00000401607 KDM4AO75164 1064 aa30.18■■■□□ 2.42
CPNE1-205ENST00000401607 TMEM87BQ96K49 555 aa30.18■■■□□ 2.42
CPNE1-205ENST00000401607 ANGEL1Q9UNK9 670 aaKnown RBP30.18■■■□□ 2.42
CPNE1-205ENST00000401607 KLF18A0A0U1RQI7 1052 aa30.18■■■□□ 2.42
CPNE1-205ENST00000401607 CCT2P78371 535 aaKnown RBP30.18■■■□□ 2.42
CPNE1-205ENST00000401607 STK11IPQ8N1F8 1099 aa30.18■■■□□ 2.42
CPNE1-205ENST00000401607 SMARCC2Q8TAQ2 1214 aa30.18■■■□□ 2.42
CPNE1-205ENST00000401607 LLPHQ9BRT6 129 aaKnown RBP30.18■■■□□ 2.42
CPNE1-205ENST00000401607 USP17L12C9JPN9 530 aa30.17■■■□□ 2.42
CPNE1-205ENST00000401607 USP17L21D6R901 530 aa30.17■■■□□ 2.42
CPNE1-205ENST00000401607 ZSCAN22P10073 491 aaPredicted RBP30.17■■■□□ 2.42
CPNE1-205ENST00000401607 IGDCC4Q8TDY8 1250 aa30.17■■■□□ 2.42
CPNE1-205ENST00000401607 SH3RF3Q8TEJ3 882 aaPredicted RBP30.17■■■□□ 2.42
CPNE1-205ENST00000401607 NAP1L2Q9ULW6 460 aaPredicted RBP30.17■■■□□ 2.42
CPNE1-205ENST00000401607 CTDNEP1O95476 244 aa30.16■■■□□ 2.42
CPNE1-205ENST00000401607 BAG3O95817 575 aa30.16■■■□□ 2.42
CPNE1-205ENST00000401607 NSUN7Q8NE18 718 aaKnown RBP30.16■■■□□ 2.42
CPNE1-205ENST00000401607 CHAMP1Q96JM3 812 aa30.16■■■□□ 2.42
CPNE1-205ENST00000401607 NCOA5Q9HCD5 579 aaKnown RBP30.16■■■□□ 2.42
CPNE1-205ENST00000401607 MTMR6Q9Y217 621 aa30.16■■■□□ 2.42
CPNE1-205ENST00000401607 KIF13BQ9NQT8 1826 aa30.16■■■□□ 2.42
CPNE1-205ENST00000401607 RRP12Q5JTH9 1297 aaKnown RBP30.15■■■□□ 2.42
CPNE1-205ENST00000401607 CERS5Q8N5B7 392 aa30.15■■■□□ 2.42
CPNE1-205ENST00000401607 FAM163AQ96GL9 167 aaPredicted RBP30.15■■■□□ 2.42
CPNE1-205ENST00000401607 MKRN1Q9UHC7 482 aaKnown RBP30.15■■■□□ 2.42
CPNE1-205ENST00000401607 HPS5Q9UPZ3 1129 aa30.15■■■□□ 2.42
CPNE1-205ENST00000401607 GPR75-ASB3A0A0A6YYF3 556 aa30.15■■■□□ 2.42
CPNE1-205ENST00000401607 GAKO14976 1311 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 BTDP43251 543 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 EVX2Q03828 476 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 SBK1Q52WX2 424 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 MCTP1Q6DN14 999 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 NOL10Q9BSC4 688 aaKnown RBP30.14■■■□□ 2.42
CPNE1-205ENST00000401607 LY9Q9HBG7 655 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 SENP2Q9HC62 589 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms