RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 LTBP3Q9NS15 1303 aa18.75■□□□□ 0.59
CHRFAM7A-203ENST00000401522 NFKBIEO00221 500 aa18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 UQCRFS1P1P0C7P4 283 aa18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 KIAA2012Q0VF49 1180 aa18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 ZNF804AQ7Z570 1209 aa18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 TAOK3Q9H2K8 898 aa18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 GNL3LQ9NVN8 582 aaKnown RBP18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 RIMBP2O15034 1052 aa18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 TOB2Q14106 344 aaPredicted RBP18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
CHRFAM7A-203ENST00000401522 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.59
CHRFAM7A-203ENST00000401522 HAUS7Q99871 368 aa18.73■□□□□ 0.59
CHRFAM7A-203ENST00000401522 CD209Q9NNX6 404 aa18.73■□□□□ 0.59
CHRFAM7A-203ENST00000401522 SEMA3EO15041 775 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 IL1R1P14778 569 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 TICAM2Q86XR7 235 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 TDRD7Q8NHU6 1098 aaKnown RBP18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 MCAMP43121 646 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 SCARF1Q14162 830 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 HSP90AA2PQ14568 343 aaPredicted RBP18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 AOC3Q16853 763 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 ZNF277Q9NRM2 450 aaPredicted RBP18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 USP25Q9UHP3 1055 aa18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHRFAM7A-203ENST00000401522 KDM4AO75164 1064 aa18.71■□□□□ 0.59
CHRFAM7A-203ENST00000401522 ADCY5O95622 1261 aa18.71■□□□□ 0.59
CHRFAM7A-203ENST00000401522 RASGRF1Q13972 1273 aa18.71■□□□□ 0.59
CHRFAM7A-203ENST00000401522 GIMAP6Q6P9H5 292 aa18.71■□□□□ 0.59
CHRFAM7A-203ENST00000401522 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
CHRFAM7A-203ENST00000401522 TAF6LQ9Y6J9 622 aa18.71■□□□□ 0.59
CHRFAM7A-203ENST00000401522 PPIP5K2O43314 1243 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 ARHGAP27Q6ZUM4 889 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 PODNQ7Z5L7 613 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 SPATA5Q8NB90 893 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 NEK1Q96PY6 1258 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 SCAND2PQ9GZW5 306 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 R3HCC1Q9Y3T6 440 aaKnown RBP18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 PDS5AQ29RF7 1337 aaKnown RBP18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 CCDC192P0DO97 292 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 COL9A3Q14050 684 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 MCMDC2Q4G0Z9 681 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 TTC6Q86TZ1 520 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 DENND2AQ9ULE3 1009 aa18.7■□□□□ 0.58
CHRFAM7A-203ENST00000401522 AKAP11Q9UKA4 1901 aa18.69■□□□□ 0.58
CHRFAM7A-203ENST00000401522 DOK7Q18PE1 504 aa18.69■□□□□ 0.58
CHRFAM7A-203ENST00000401522 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
CHRFAM7A-203ENST00000401522 TCEANC2Q96MN5 208 aa18.69■□□□□ 0.58
CHRFAM7A-203ENST00000401522 IQSEC3Q9UPP2 1182 aaPredicted RBP18.69■□□□□ 0.58
CHRFAM7A-203ENST00000401522 G3V3G9 751 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 DCAF8Q5TAQ9 597 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 LARGE2Q8N3Y3 721 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 GTF3C6Q969F1 213 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 DNAJC2Q99543 621 aaKnown RBP18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 GPR162Q16538 588 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 PI16Q6UXB8 463 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 DBNDD1Q9H9R9 158 aa18.68■□□□□ 0.58
CHRFAM7A-203ENST00000401522 ECE2O60344 883 aa18.67■□□□□ 0.58
CHRFAM7A-203ENST00000401522 DTNBO60941 627 aa18.67■□□□□ 0.58
CHRFAM7A-203ENST00000401522 ZAP70P43403 619 aa18.67■□□□□ 0.58
CHRFAM7A-203ENST00000401522 RASSF7Q02833 373 aa18.67■□□□□ 0.58
CHRFAM7A-203ENST00000401522 FERMT3Q86UX7 667 aa18.67■□□□□ 0.58
CHRFAM7A-203ENST00000401522 NDUFB9Q9Y6M9 179 aa18.67■□□□□ 0.58
CHRFAM7A-203ENST00000401522 GRIN3BO60391 1043 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 HMGB1P09429 215 aaKnown RBP18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 PRELPP51888 382 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 NUP62CLQ9H1M0 184 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 PAG1Q9NWQ8 432 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 COL1A1P02452 1464 aaPredicted RBP18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 SASS6Q6UVJ0 657 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 SPATA32Q96LK8 384 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 UTRNP46939 3433 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 FAM205AQ6ZU69 1335 aa18.66■□□□□ 0.58
CHRFAM7A-203ENST00000401522 COL4A5P29400 1685 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 GOLIM4O00461 696 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 TPM3P06753 285 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 STK3Q13188 491 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 TTF1Q15361 905 aaPredicted RBP18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 JDP2Q8WYK2 163 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 HELLSQ9NRZ9 838 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 DDX19AQ9NUU7 478 aaKnown RBP18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 ZNRF3Q9ULT6 936 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 CHD4Q14839 1912 aa18.65■□□□□ 0.58
CHRFAM7A-203ENST00000401522 GOLGA6L4A6NEF3 574 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 CYP21A2P08686 494 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 LMNB1P20700 586 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 CCDC129Q6ZRS4 1044 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 Q6ZUG5 572 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 NIM1KQ8IY84 436 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 WDR66Q8TBY9 1149 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 LEO1Q8WVC0 666 aaPredicted RBP18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 PIBF1Q8WXW3 757 aa18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.58
CHRFAM7A-203ENST00000401522 SALL1Q9NSC2 1324 aa18.64■□□□□ 0.57
CHRFAM7A-203ENST00000401522 MYH13Q9UKX3 1938 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms