RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 LDHCP07864 332 aa19.26■□□□□ 0.67
HMGA1-204ENST00000401473 SLF2Q8IX21 1173 aa19.26■□□□□ 0.67
HMGA1-204ENST00000401473 SEC62Q99442 399 aaKnown RBP19.26■□□□□ 0.67
HMGA1-204ENST00000401473 AATFQ9NY61 560 aaKnown RBP eCLIP19.26■□□□□ 0.675e-10■□□□□ 8.3
HMGA1-204ENST00000401473 BTDP43251 543 aa19.26■□□□□ 0.67
HMGA1-204ENST00000401473 ZSCAN25Q6NSZ9 544 aa19.26■□□□□ 0.67
HMGA1-204ENST00000401473 SCAF8Q9UPN6 1271 aaKnown RBP19.26■□□□□ 0.67
HMGA1-204ENST00000401473 ZFYP08048 801 aaPredicted RBP19.25■□□□□ 0.67
HMGA1-204ENST00000401473 RHBDL3P58872 404 aa19.25■□□□□ 0.67
HMGA1-204ENST00000401473 DYNLL1P63167 89 aaKnown RBP19.25■□□□□ 0.67
HMGA1-204ENST00000401473 CDC42EP5Q6NZY7 148 aa19.25■□□□□ 0.67
HMGA1-204ENST00000401473 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
HMGA1-204ENST00000401473 PPP4CP60510 307 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 TMED8Q6PL24 325 aaPredicted RBP19.24■□□□□ 0.67
HMGA1-204ENST00000401473 RIOK1Q9BRS2 568 aaKnown RBP19.24■□□□□ 0.67
HMGA1-204ENST00000401473 MAST2Q6P0Q8 1798 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 CLRN2A0PK11 232 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 ZMYM1Q5SVZ6 1142 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 LDHDQ86WU2 507 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 APPBP2Q92624 585 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 USP40Q9NVE5 1235 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 PGAP2Q9UHJ9 254 aa19.24■□□□□ 0.67
HMGA1-204ENST00000401473 TOMM70O94826 608 aa19.23■□□□□ 0.67
HMGA1-204ENST00000401473 CACNB3P54284 484 aa19.23■□□□□ 0.67
HMGA1-204ENST00000401473 MAP1SQ66K74 1059 aaPredicted RBP19.23■□□□□ 0.67
HMGA1-204ENST00000401473 TICAM2Q86XR7 235 aa19.23■□□□□ 0.67
HMGA1-204ENST00000401473 SH3RF3Q8TEJ3 882 aaPredicted RBP19.23■□□□□ 0.67
HMGA1-204ENST00000401473 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 IL25Q9H293 177 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 ZNF70Q9UC06 446 aaPredicted RBP19.22■□□□□ 0.67
HMGA1-204ENST00000401473 CLEC11AQ9Y240 323 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 CEP350Q5VT06 3117 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 M0R2C6 588 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 BAG3O95817 575 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 CHMLP26374 656 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 NMIQ13287 307 aaPredicted RBP19.22■□□□□ 0.67
HMGA1-204ENST00000401473 LRRFIP1Q32MZ4 808 aaKnown RBP19.22■□□□□ 0.67
HMGA1-204ENST00000401473 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
HMGA1-204ENST00000401473 ANGEL2Q5VTE6 544 aaKnown RBP19.22■□□□□ 0.67
HMGA1-204ENST00000401473 CWC27Q6UX04 472 aaKnown RBP19.22■□□□□ 0.67
HMGA1-204ENST00000401473 ZC3H15Q8WU90 426 aaKnown RBP19.22■□□□□ 0.67
HMGA1-204ENST00000401473 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
HMGA1-204ENST00000401473 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
HMGA1-204ENST00000401473 NFIAQ12857 509 aa19.21■□□□□ 0.67
HMGA1-204ENST00000401473 DLK2Q6UY11 383 aa19.21■□□□□ 0.67
HMGA1-204ENST00000401473 LCORLQ8N3X6 602 aa19.21■□□□□ 0.67
HMGA1-204ENST00000401473 ARMT1Q9H993 441 aa19.21■□□□□ 0.67
HMGA1-204ENST00000401473 GGA3Q9NZ52 723 aa19.21■□□□□ 0.67
HMGA1-204ENST00000401473 MYO1BO43795 1136 aa19.2■□□□□ 0.66
HMGA1-204ENST00000401473 WDHD1O75717 1129 aaPredicted RBP19.2■□□□□ 0.66
HMGA1-204ENST00000401473 RFX7Q2KHR2 1363 aa19.2■□□□□ 0.66
HMGA1-204ENST00000401473 MBD4O95243 580 aa19.2■□□□□ 0.66
HMGA1-204ENST00000401473 CHADLQ6NUI6 762 aa19.2■□□□□ 0.66
HMGA1-204ENST00000401473 CCDC129Q6ZRS4 1044 aa19.2■□□□□ 0.66
HMGA1-204ENST00000401473 STRBPQ96SI9 672 aaKnown RBP19.2■□□□□ 0.66
HMGA1-204ENST00000401473 DDX4Q9NQI0 724 aaKnown RBP19.2■□□□□ 0.66
HMGA1-204ENST00000401473 PRKAB2O43741 272 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 MCMDC2Q4G0Z9 681 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 ZNF589Q86UQ0 364 aaPredicted RBP19.19■□□□□ 0.66
HMGA1-204ENST00000401473 RBM46Q8TBY0 533 aaKnown RBP19.19■□□□□ 0.66
HMGA1-204ENST00000401473 AIDAQ96BJ3 306 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 CDK5RAP2Q96SN8 1893 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 VEZTQ9HBM0 779 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 HELLSQ9NRZ9 838 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 DIAPH3Q9NSV4 1193 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
HMGA1-204ENST00000401473 TCP10L2B9ZVM9 353 aa19.18■□□□□ 0.66
HMGA1-204ENST00000401473 GPAA1O43292 621 aa19.18■□□□□ 0.66
HMGA1-204ENST00000401473 ITGBL1O95965 494 aaPredicted RBP19.18■□□□□ 0.66
HMGA1-204ENST00000401473 FMR1Q06787 632 aaKnown RBP eCLIP19.18■□□□□ 0.66
HMGA1-204ENST00000401473 ZFPM1Q8IX07 1006 aa19.18■□□□□ 0.66
HMGA1-204ENST00000401473 TGFBRAP1Q8WUH2 860 aa19.18■□□□□ 0.66
HMGA1-204ENST00000401473 NOL10Q9BSC4 688 aaKnown RBP19.18■□□□□ 0.66
HMGA1-204ENST00000401473 HIP1O00291 1037 aa19.18■□□□□ 0.66
HMGA1-204ENST00000401473 TEX11Q8IYF3 940 aa19.18■□□□□ 0.66
HMGA1-204ENST00000401473 IDI2Q9BXS1 227 aa19.18■□□□□ 0.66
HMGA1-204ENST00000401473 GLIS2Q9BZE0 524 aaPredicted RBP19.18■□□□□ 0.66
HMGA1-204ENST00000401473 TCP10Q12799 353 aa19.17■□□□□ 0.66
HMGA1-204ENST00000401473 SMC1BQ8NDV3 1235 aa19.17■□□□□ 0.66
HMGA1-204ENST00000401473 SDR42E1Q8WUS8 393 aa19.17■□□□□ 0.66
HMGA1-204ENST00000401473 TRAF5O00463 557 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 FOXP2O15409 715 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 PLCG2P16885 1265 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 KRT26Q7Z3Y9 468 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 DCPSQ96C86 337 aaKnown RBP19.16■□□□□ 0.66
HMGA1-204ENST00000401473 DEFB129Q9H1M3 183 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 MKRN1Q9UHC7 482 aaKnown RBP19.16■□□□□ 0.66
HMGA1-204ENST00000401473 CNTNAP1P78357 1384 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 PITPNM2Q9BZ72 1349 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 ADM5C9JUS6 153 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 PICALMQ13492 652 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 VPS53Q5VIR6 699 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 FKBP1CQ5VVH2 108 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 PRAMEF18Q5VWM3 479 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 USP48Q86UV5 1035 aa19.16■□□□□ 0.66
HMGA1-204ENST00000401473 PCNTO95613 3336 aa19.15■□□□□ 0.66
HMGA1-204ENST00000401473 RASA3Q14644 834 aa19.15■□□□□ 0.66
HMGA1-204ENST00000401473 CERS3Q8IU89 383 aa19.15■□□□□ 0.66
HMGA1-204ENST00000401473 MAPKAPK5Q8IW41 473 aa19.15■□□□□ 0.66
HMGA1-204ENST00000401473 CDAN1Q8IWY9 1227 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms