RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GGA3Q9NZ52 723 aa15.06■□□□□ 0
HLA-DQB1-203ENST00000399082 CDK5RAP2Q96SN8 1893 aa15.06■□□□□ 0
HLA-DQB1-203ENST00000399082 GPR75-ASB3A0A0A6YYF3 556 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 BTDP43251 543 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 RBM5P52756 815 aaKnown RBP eCLIP15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 RHBDL3P58872 404 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 MAP3K12Q12852 859 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 SLC9C2Q5TAH2 1124 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 LDHDQ86WU2 507 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 SCAF8Q9UPN6 1271 aaKnown RBP15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 GTF3C3Q9Y5Q9 886 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 ZNF532Q9HCE3 1301 aa15.05■□□□□ -0
HLA-DQB1-203ENST00000399082 CLRN2A0PK11 232 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 CYP7A1P22680 504 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 RGS3P49796 1198 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 CACNB3P54284 484 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 ANGEL2Q5VTE6 544 aaKnown RBP15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 CDC42EP5Q6NZY7 148 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 DLK2Q6UY11 383 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 ZC3H15Q8WU90 426 aaKnown RBP15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 EVI5LQ96CN4 794 aa15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 ZNF70Q9UC06 446 aaPredicted RBP15.04■□□□□ -0
HLA-DQB1-203ENST00000399082 FOCADQ5VW36 1801 aa15.03■□□□□ -0
HLA-DQB1-203ENST00000399082 SDSP20132 328 aa15.03■□□□□ -0
HLA-DQB1-203ENST00000399082 DYNLL1P63167 89 aaKnown RBP15.03■□□□□ -0
HLA-DQB1-203ENST00000399082 GSTO1P78417 241 aa15.03■□□□□ -0
HLA-DQB1-203ENST00000399082 MAP1SQ66K74 1059 aaPredicted RBP15.03■□□□□ -0
HLA-DQB1-203ENST00000399082 RIOK1Q9BRS2 568 aaKnown RBP15.03■□□□□ -0
HLA-DQB1-203ENST00000399082 FSD1Q9BTV5 496 aa15.03■□□□□ -0
HLA-DQB1-203ENST00000399082 CNTNAP1P78357 1384 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 PITPNM2Q9BZ72 1349 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 WDHD1O75717 1129 aaPredicted RBP15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 LDHCP07864 332 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 PPP4CP60510 307 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 NFIAQ12857 509 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 UBE3CQ15386 1083 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 CHADLQ6NUI6 762 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 TMED8Q6PL24 325 aaPredicted RBP15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 SLF2Q8IX21 1173 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 MIGA1Q8NAN2 632 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 SH3RF3Q8TEJ3 882 aaPredicted RBP15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 OSBP2Q969R2 916 aa15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 AATFQ9NY61 560 aaKnown RBP eCLIP15.02■□□□□ -0
HLA-DQB1-203ENST00000399082 DDX60LQ5H9U9 1706 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TRIM6-TRIM34B2RNG4 842 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ADM5C9JUS6 153 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 RNF113AO15541 343 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TOMM70O94826 608 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 FMR1Q06787 632 aaKnown RBP eCLIP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 CNTROBQ8N137 903 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 RBM46Q8TBY0 533 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 RILPL2Q969X0 211 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 GLIS2Q9BZE0 524 aaPredicted RBP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 PUS7LQ9H0K6 701 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 DDX4Q9NQI0 724 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 USP40Q9NVE5 1235 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 FAM198AQ9UFP1 575 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ITGBL1O95965 494 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ZMYM1Q5SVZ6 1142 aa15□□□□□ -0.01
HLA-DQB1-203ENST00000399082 CDAN1Q8IWY9 1227 aa15□□□□□ -0.01
HLA-DQB1-203ENST00000399082 LCORLQ8N3X6 602 aa15□□□□□ -0.01
HLA-DQB1-203ENST00000399082 APPBP2Q92624 585 aa15□□□□□ -0.01
HLA-DQB1-203ENST00000399082 SEC62Q99442 399 aaKnown RBP15□□□□□ -0.01
HLA-DQB1-203ENST00000399082 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 A0A0D9SFI3 127 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 M0R2C6 588 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TRAF5O00463 557 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ZFYP08048 801 aaPredicted RBP14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ZSCAN25Q6NSZ9 544 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 USP48Q86UV5 1035 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ZFPM1Q8IX07 1006 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 FAM227BQ96M60 508 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 VEZTQ9HBM0 779 aa14.99□□□□□ -0.01
HLA-DQB1-203ENST00000399082 MAGEB6P1A0A0J9YX57 407 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TCP10L2B9ZVM9 353 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 MYO1BO43795 1136 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 MBD4O95243 580 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 NMIQ13287 307 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 BMP2KLQ5H9B9 411 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 FKBP1CQ5VVH2 108 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 PRAMEF18Q5VWM3 479 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 KRT26Q7Z3Y9 468 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 APOBEC3FQ8IUX4 373 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 SMC1BQ8NDV3 1235 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 DCPSQ96C86 337 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TEPSINQ96N21 525 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 IL25Q9H293 177 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 SIPA1L1O43166 1804 aa14.98□□□□□ -0.01
HLA-DQB1-203ENST00000399082 PASKQ96RG2 1323 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 FOXP2O15409 715 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 BAG3O95817 575 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 RASA3Q14644 834 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 SH3BP5LQ7L8J4 393 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms