RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 CLASRPQ8N2M8 674 aaKnown RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 PPP1R13BQ96KQ4 1090 aa11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 SNRKQ9NRH2 765 aa11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 RRP15Q9Y3B9 282 aaKnown RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 GSDMDP57764 484 aa11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 OLFM4Q6UX06 510 aa11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 LEO1Q8WVC0 666 aaPredicted RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 TFIP11Q9UBB9 837 aaKnown RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 C4BP0C0L5 1744 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 LOC102724159A0A0B4J2E5 919 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 DDR1Q08345 913 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 PWP2Q15269 919 aaKnown RBP11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 RC3H1Q5TC82 1133 aaKnown RBP11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 GOLGA6L1Q8N7Z2 621 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 BRMS1Q9HCU9 246 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 CNNM1Q9NRU3 951 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 PDE8AO60658 829 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 TUBB4AP04350 444 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 SMC1AQ14683 1233 aaKnown RBP11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 ME3Q16798 604 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 REXO1L1PQ8IX06 675 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
HMGCLL1-205ENST00000398661 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 CSF1RP07333 972 aa11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 GUCY2CP25092 1073 aa11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 PGBD1Q96JS3 809 aa11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 GPR101Q96P66 508 aaPredicted RBP11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 PSD3Q9NYI0 1048 aa11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 CARMIL3Q8ND23 1372 aa11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
HMGCLL1-205ENST00000398661 BECN2A8MW95 431 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 SASH3O75995 380 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 TBC1D8O95759 1140 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 TPM1P09493 284 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 STX1AQ16623 288 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 TNNI3KQ59H18 835 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 IQUBQ8NA54 791 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 MNS1Q8NEH6 495 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 JAKMIP1Q96N16 626 aaKnown RBP11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 JAG2Q9Y219 1238 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 FPGT-TNNI3KV9GXZ4 949 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 N4BP2Q86UW6 1770 aaPredicted RBP11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 EYA2O00167 538 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 PLSCR1O15162 318 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 PDCP20941 246 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 PSEN1P49768 467 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 METTL24Q5JXM2 366 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 CCDC158Q5M9N0 1113 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 EXOC4Q96A65 974 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 CAMKK2Q96RR4 588 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 OSBPL5Q9H0X9 879 aaPredicted RBP11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 CYP46A1Q9Y6A2 500 aa11.71□□□□□ -0.53
HMGCLL1-205ENST00000398661 TADA3O75528 432 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 SCARF1Q14162 830 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 ADCK5Q3MIX3 580 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 NOM1Q5C9Z4 860 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 NCAPGQ9BPX3 1015 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 LY75O60449 1722 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 PNPLA7Q6ZV29 1317 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 KLRK1P26718 216 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 CC2D1AQ6P1N0 951 aaPredicted RBP11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 DHX40Q8IX18 779 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 TM6SF1Q9BZW5 370 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 PHLPP2Q6ZVD8 1323 aa11.7□□□□□ -0.54
HMGCLL1-205ENST00000398661 ACTN2P35609 894 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 KCNJ6P48051 423 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 LMAN1P49257 510 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 TTC31Q49AM3 519 aaPredicted RBP11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 PRR5LQ6MZQ0 368 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 NBPF11Q86T75 865 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 SRRTQ9BXP5 876 aaKnown RBP11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 TPCN1Q9ULQ1 816 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 JRKLQ9Y4A0 524 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 EFCAB8A8MWE9 144 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 SERPINB2P05120 415 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 MMP10P09238 476 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 CWC27Q6UX04 472 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms