RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 BICDL1Q6ZP65 573 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 FAM177A1Q8N128 213 aaPredicted RBP8.66□□□□□ -1.02
RGPD1-201ENST00000398193 RIOK1Q9BRS2 568 aaKnown RBP8.66□□□□□ -1.02
RGPD1-201ENST00000398193 EPB41L4AQ9HCS5 686 aaPredicted RBP8.66□□□□□ -1.02
RGPD1-201ENST00000398193 ORC4O43929 436 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 FKBP1AP62942 108 aaKnown RBP8.66□□□□□ -1.02
RGPD1-201ENST00000398193 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 BRAPQ7Z569 592 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 USP48Q86UV5 1035 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 GPT2Q8TD30 523 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 CALM1P0DP23 149 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 CALM2P0DP24 149 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 CALM3P0DP25 149 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 LRSAM1Q6UWE0 723 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 TBC1D10CQ8IV04 446 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 TBC1D22AQ8WUA7 517 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 PTPDC1A2A3K4 754 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 PDE6BP35913 854 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 PPP4CP60510 307 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 NSUN4Q96CB9 384 aaKnown RBP8.66□□□□□ -1.02
RGPD1-201ENST00000398193 H3BQV1 296 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 PPARAQ07869 468 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 IFFO2Q5TF58 517 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 NECAB1Q8N987 351 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 GRPEL1Q9HAV7 217 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 RAI14Q9P0K7 980 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 CCDC196A0A1B0GTZ2 297 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 NPR1P16066 1061 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 UVSSAQ2YD98 709 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 LCORLQ8N3X6 602 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 ARMT1Q9H993 441 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 RBM28Q9NW13 759 aaKnown RBP8.65□□□□□ -1.02
RGPD1-201ENST00000398193 PLCG2P16885 1265 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 SYNE3Q6ZMZ3 975 aa8.65□□□□□ -1.02
RGPD1-201ENST00000398193 COL11A2P13942 1736 aaPredicted RBP8.65□□□□□ -1.03
RGPD1-201ENST00000398193 ERICH2A1L162 156 aa8.65□□□□□ -1.03
RGPD1-201ENST00000398193 RXRBP28702 533 aa8.65□□□□□ -1.03
RGPD1-201ENST00000398193 TTLL5Q6EMB2 1281 aa8.65□□□□□ -1.03
RGPD1-201ENST00000398193 IGDCC4Q8TDY8 1250 aa8.65□□□□□ -1.03
RGPD1-201ENST00000398193 GGA1Q9UJY5 639 aa8.65□□□□□ -1.03
RGPD1-201ENST00000398193 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.03
RGPD1-201ENST00000398193 NPHP1O15259 732 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 DDAH1O94760 285 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 CTDNEP1O95476 244 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 TDO2P48775 406 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 ESR2Q92731 530 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 LY9Q9HBG7 655 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 FAM205AQ6ZU69 1335 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 CHGBP05060 677 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 GYG1P46976 350 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 STYK1Q6J9G0 422 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 NEDD4P46934 1319 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 APPP05067 770 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 TCP11L1Q9NUJ3 509 aa8.64□□□□□ -1.03
RGPD1-201ENST00000398193 FAM163AQ96GL9 167 aaPredicted RBP8.64□□□□□ -1.03
RGPD1-201ENST00000398193 KLF18A0A0U1RQI7 1052 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 CCDC69A6NI79 296 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 GOLGA8BA8MQT2 603 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 BAG3O95817 575 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 AMOTL1Q8IY63 956 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 NOL10Q9BSC4 688 aaKnown RBP8.63□□□□□ -1.03
RGPD1-201ENST00000398193 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
RGPD1-201ENST00000398193 CDC37L1Q7L3B6 337 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 AMIGO3Q86WK7 504 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 ANKS1AQ92625 1134 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 DDX19AQ9NUU7 478 aaKnown RBP8.63□□□□□ -1.03
RGPD1-201ENST00000398193 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
RGPD1-201ENST00000398193 TRIM37O94972 964 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 METAP2P50579 478 aaKnown RBP eCLIP8.63□□□□□ -1.03
RGPD1-201ENST00000398193 MECOMQ03112 1051 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 CYB5R4Q7L1T6 521 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 ZNF287Q9HBT7 754 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 BRPF3Q9ULD4 1205 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 CNPY2Q9Y2B0 182 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 VPS37CA5D8V6 355 aaPredicted RBP8.63□□□□□ -1.03
RGPD1-201ENST00000398193 GPSM2P81274 684 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 CCDC173Q0VFZ6 552 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 ANKIB1Q9P2G1 1089 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.63□□□□□ -1.03
RGPD1-201ENST00000398193 ATP6V0A2Q9Y487 856 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 TMEM67Q5HYA8 995 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 COA1Q9GZY4 146 aa8.63□□□□□ -1.03
RGPD1-201ENST00000398193 ZBTB43O43298 467 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 LDHBP07195 334 aaKnown RBP8.62□□□□□ -1.03
RGPD1-201ENST00000398193 ANP32BQ92688 251 aaKnown RBP8.62□□□□□ -1.03
RGPD1-201ENST00000398193 TSPY26PQ9H489 355 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
RGPD1-201ENST00000398193 SLC12A7Q9Y666 1083 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 CTAGE5O15320 804 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 CAVIN2O95810 425 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 CAVIN1Q6NZI2 390 aaKnown RBP8.62□□□□□ -1.03
RGPD1-201ENST00000398193 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 MROH7-TTC4A0A0A0MT08 1334 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 ZNF646O15015 1829 aaPredicted RBP8.62□□□□□ -1.03
RGPD1-201ENST00000398193 CPLX1O14810 134 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms