RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 LIMCH1Q9UPQ0 1083 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 RTL9Q8NET4 1388 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 PDE6AP16499 860 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 STX1AQ16623 288 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 KIF18AQ8NI77 898 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 HIBADHP31937 336 aaKnown RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 TTC22Q5TAA0 569 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 TLDC2A0PJX2 215 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 GNA11P29992 359 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 CCDC183Q5T5S1 534 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 BANK1Q8NDB2 785 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 RPS6KC1Q96S38 1066 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 NAA25Q14CX7 972 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 SLC7A5P2Q9GIP4 190 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 CUX1P39880 1505 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 ZNF830Q96NB3 372 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 STX17P56962 302 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 LMBR1Q8WVP7 490 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 PSPC1Q8WXF1 523 aaKnown RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 AP5M1Q9H0R1 490 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 SUDS3Q9H7L9 328 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 SPOPO43791 374 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 ANKRD35Q8N283 1001 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 CCDC110Q8TBZ0 833 aa12.62□□□□□ -0.39
RGPD2-201ENST00000398146 N4BP2L2Q92802 583 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 NSRP1Q9H0G5 558 aaKnown RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 PRDM5Q9NQX1 630 aaPredicted RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 OLA1Q9NTK5 396 aaKnown RBP12.62□□□□□ -0.39
RGPD2-201ENST00000398146 PLEKHG3A1L390 1219 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 MUM1L1Q5H9M0 696 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 FMNL3Q8IVF7 1028 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 TBC1D7Q9P0N9 293 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 RXRBP28702 533 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 POMGNT1Q8WZA1 660 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 CTAGE5O15320 804 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 ALDH3A1P30838 453 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 PABPC4Q13310 644 aaKnown RBP eCLIP12.61□□□□□ -0.39
RGPD2-201ENST00000398146 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
RGPD2-201ENST00000398146 ZEB2O60315 1214 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 UBXN1Q04323 297 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 SCYL2Q6P3W7 929 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 DTHD1Q6ZMT9 781 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 MTERF4Q7Z6M4 381 aaKnown RBP12.61□□□□□ -0.39
RGPD2-201ENST00000398146 C16orf45Q96MC5 204 aaPredicted RBP12.61□□□□□ -0.39
RGPD2-201ENST00000398146 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
RGPD2-201ENST00000398146 EXOC7Q9UPT5 735 aa12.61□□□□□ -0.39
RGPD2-201ENST00000398146 SUGCTQ9HAC7 445 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 ALDH1B1P30837 517 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 SLC12A2P55011 1212 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 FOXD4Q12950 439 aaPredicted RBP12.6□□□□□ -0.39
RGPD2-201ENST00000398146 CLUL1Q15846 466 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 PIK3R4Q99570 1358 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 TYW5A2RUC4 315 aaKnown RBP12.6□□□□□ -0.39
RGPD2-201ENST00000398146 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 PDE4DQ08499 809 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 LIN9Q5TKA1 542 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 DCUN1D2Q6PH85 259 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 Q6ZUG5 572 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 SND1Q7KZF4 910 aaKnown RBP eCLIP12.6□□□□□ -0.39
RGPD2-201ENST00000398146 NCAPGQ9BPX3 1015 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 SFMBT1Q9UHJ3 866 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 AKNAQ7Z591 1439 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 ALAS1P13196 640 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 SLC1A4P43007 532 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 GNG11P61952 73 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 FAM102BQ5T8I3 360 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
RGPD2-201ENST00000398146 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
RGPD2-201ENST00000398146 MAST3O60307 1309 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 CDR2Q01850 454 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 GCNAQ96QF7 691 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 PA2G4Q9UQ80 394 aaKnown RBP12.59□□□□□ -0.39
RGPD2-201ENST00000398146 UBASH3AP57075 661 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 ZNF174Q15697 407 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
RGPD2-201ENST00000398146 PPP1R16BQ96T49 567 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 UBN1Q9NPG3 1134 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
RGPD2-201ENST00000398146 TNNI1P19237 187 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
RGPD2-201ENST00000398146 GNAT2P19087 354 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms